Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4191

Experiment: LB control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPfGW456L13_4190 and PfGW456L13_4191 are separated by 109 nucleotidesPfGW456L13_4191 and PfGW456L13_4192 are separated by 202 nucleotides PfGW456L13_4190 - Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-), at 4,701,706 to 4,702,638 _4190 PfGW456L13_4191 - Septum site-determining protein MinC, at 4,702,748 to 4,703,494 _4191 PfGW456L13_4192 - Septum site-determining protein MinD, at 4,703,697 to 4,704,509 _4192 Position (kb) 4702 4703 4704Strain fitness (log2 ratio) -1 0 1at 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.672 kb on + strandat 4702.673 kb on - strandat 4702.673 kb on - strandat 4702.673 kb on - strandat 4702.715 kb on + strandat 4702.747 kb on + strandat 4702.747 kb on + strandat 4702.747 kb on + strandat 4702.747 kb on + strandat 4702.747 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB control
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4,702,672 + +0.8
4,702,672 + -0.3
4,702,672 + -1.0
4,702,672 + +0.9
4,702,672 + +0.8
4,702,672 + -0.4
4,702,672 + +0.7
4,702,672 + +0.5
4,702,672 + -0.0
4,702,672 + +0.6
4,702,672 + +0.6
4,702,672 + +0.0
4,702,672 + +0.0
4,702,672 + -1.1
4,702,672 + -0.6
4,702,672 + +0.3
4,702,673 - -0.2
4,702,673 - +0.7
4,702,673 - -0.0
4,702,715 + -0.2
4,702,747 + +1.6
4,702,747 + +1.2
4,702,747 + -1.5
4,702,747 + +0.4
4,702,747 + -1.7

Or see this region's nucleotide sequence