Strain Fitness in Pseudomonas putida KT2440 around PP_3227

Experiment: 3-methyl-1-butanol 0.25 vol% (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 0.25 vol% (C)
3,662,088	+		PP_3226	0.35	-0.4
3,662,089	-		PP_3226	0.35	+1.6
3,662,089	-		PP_3226	0.35	+0.8
3,662,091	-		PP_3226	0.35	+1.0
3,662,121	-		PP_3226	0.38	-0.5
3,662,343	+		PP_3226	0.57	+0.1
3,662,373	+		PP_3226	0.60	+1.2
3,662,577	+		PP_3226	0.78	-2.9
3,662,578	-		PP_3226	0.78	+0.2
3,662,685	-		PP_3226	0.87	-0.9
3,662,856	+				-0.5
3,662,901	+				+1.7
3,663,087	-				+0.5
3,663,136	-		PP_3227	0.13	-1.3
3,663,142	+		PP_3227	0.14	+1.4
3,663,143	-		PP_3227	0.14	-3.1
3,663,143	-		PP_3227	0.14	-0.4
3,663,176	-				+1.2
3,663,176	-		PP_3227	0.18	-1.7
3,663,351	-				+0.9
3,663,368	+		PP_3227	0.39	-1.5
3,663,894	+				+2.1
3,663,971	+				+1.6
3,663,992	-				+1.1
3,664,215	+		PP_3228	0.11	+0.8
3,664,264	+				-1.4
3,664,423	+		PP_3228	0.32	-4.2
3,664,789	+		PP_3228	0.70	+0.1
3,664,790	-		PP_3228	0.70	-0.4
3,664,839	+		PP_3228	0.75	-0.9
3,664,844	-		PP_3228	0.76	+1.5