Experiment: 3-methyl-1-butanol 0.25 vol% (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0648 and PP_0649 are separated by 87 nucleotides PP_0649 and PP_0650 are separated by 27 nucleotides PP_0650 and PP_0651 are separated by 108 nucleotides
PP_0648: PP_0648 - conserved protein of unknown function, at 757,379 to 757,834
_0648
PP_0649: PP_0649 - MutT/nudix family protein, at 757,922 to 758,332
_0649
PP_0650: PP_0650 - conserved protein of unknown function, at 758,360 to 758,470
_0650
PP_0651: PP_0651 - Acetyltransferase, GNAT family, at 758,579 to 759,028
_0651
Position (kb) 758
759 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 757.379 kb on - strand at 757.412 kb on + strand at 757.440 kb on + strand, within PP_0648 at 757.539 kb on + strand, within PP_0648 at 757.540 kb on - strand, within PP_0648 at 757.594 kb on + strand, within PP_0648 at 757.595 kb on - strand, within PP_0648 at 757.606 kb on + strand, within PP_0648 at 757.606 kb on + strand, within PP_0648 at 757.607 kb on - strand, within PP_0648 at 757.607 kb on - strand, within PP_0648 at 757.607 kb on - strand, within PP_0648 at 757.607 kb on - strand, within PP_0648 at 757.614 kb on - strand, within PP_0648 at 757.614 kb on - strand, within PP_0648 at 757.614 kb on - strand, within PP_0648 at 757.633 kb on + strand, within PP_0648 at 757.634 kb on - strand, within PP_0648 at 757.637 kb on + strand, within PP_0648 at 757.637 kb on + strand, within PP_0648 at 757.637 kb on + strand, within PP_0648 at 757.637 kb on + strand, within PP_0648 at 757.637 kb on + strand, within PP_0648 at 757.637 kb on + strand, within PP_0648 at 757.637 kb on + strand, within PP_0648 at 757.638 kb on - strand, within PP_0648 at 757.638 kb on - strand, within PP_0648 at 757.638 kb on - strand, within PP_0648 at 757.638 kb on - strand, within PP_0648 at 757.638 kb on - strand, within PP_0648 at 757.638 kb on - strand, within PP_0648 at 757.638 kb on - strand, within PP_0648 at 757.638 kb on - strand, within PP_0648 at 757.638 kb on - strand, within PP_0648 at 757.639 kb on + strand, within PP_0648 at 757.639 kb on + strand, within PP_0648 at 757.640 kb on - strand, within PP_0648 at 757.640 kb on - strand, within PP_0648 at 757.641 kb on - strand, within PP_0648 at 757.673 kb on + strand, within PP_0648 at 757.674 kb on - strand, within PP_0648 at 757.674 kb on - strand, within PP_0648 at 757.693 kb on + strand, within PP_0648 at 757.756 kb on + strand, within PP_0648 at 757.756 kb on + strand, within PP_0648 at 757.757 kb on - strand, within PP_0648 at 757.757 kb on - strand, within PP_0648 at 757.767 kb on + strand, within PP_0648 at 757.767 kb on + strand, within PP_0648 at 757.803 kb on - strand at 757.838 kb on + strand at 757.880 kb on + strand at 757.880 kb on + strand at 757.880 kb on + strand at 757.900 kb on + strand at 757.900 kb on + strand at 757.900 kb on + strand at 757.947 kb on + strand at 757.947 kb on + strand at 757.948 kb on - strand at 757.948 kb on - strand at 757.948 kb on - strand at 757.948 kb on - strand at 757.948 kb on - strand at 757.980 kb on + strand, within PP_0649 at 757.998 kb on + strand, within PP_0649 at 757.998 kb on + strand, within PP_0649 at 757.999 kb on - strand, within PP_0649 at 758.087 kb on - strand, within PP_0649 at 758.087 kb on - strand, within PP_0649 at 758.189 kb on - strand, within PP_0649 at 758.189 kb on - strand, within PP_0649 at 758.306 kb on - strand at 758.330 kb on + strand at 758.331 kb on - strand at 758.331 kb on - strand at 758.331 kb on - strand at 758.331 kb on - strand at 758.340 kb on + strand at 758.340 kb on + strand at 758.341 kb on - strand at 758.341 kb on - strand at 758.358 kb on - strand at 758.384 kb on + strand, within PP_0650 at 758.384 kb on + strand, within PP_0650 at 758.385 kb on - strand, within PP_0650 at 758.385 kb on - strand, within PP_0650 at 758.387 kb on + strand, within PP_0650 at 758.387 kb on + strand, within PP_0650 at 758.388 kb on - strand, within PP_0650 at 758.388 kb on - strand, within PP_0650 at 758.388 kb on - strand, within PP_0650 at 758.388 kb on - strand, within PP_0650 at 758.446 kb on - strand, within PP_0650 at 758.446 kb on - strand, within PP_0650 at 758.451 kb on + strand, within PP_0650 at 758.451 kb on + strand, within PP_0650 at 758.451 kb on + strand, within PP_0650 at 758.452 kb on - strand, within PP_0650 at 758.452 kb on - strand, within PP_0650 at 758.486 kb on + strand at 758.486 kb on + strand at 758.486 kb on + strand at 758.514 kb on + strand at 758.514 kb on + strand at 758.515 kb on - strand at 758.538 kb on + strand at 758.539 kb on - strand at 758.539 kb on - strand at 758.539 kb on - strand at 758.560 kb on - strand at 758.562 kb on - strand at 758.626 kb on - strand, within PP_0651 at 758.626 kb on - strand, within PP_0651 at 758.638 kb on + strand, within PP_0651 at 758.638 kb on + strand, within PP_0651 at 758.639 kb on - strand, within PP_0651 at 758.640 kb on + strand, within PP_0651 at 758.640 kb on + strand, within PP_0651 at 758.737 kb on + strand, within PP_0651 at 758.738 kb on - strand at 758.757 kb on + strand, within PP_0651 at 758.757 kb on + strand, within PP_0651 at 758.758 kb on - strand, within PP_0651 at 758.758 kb on - strand, within PP_0651 at 758.763 kb on + strand, within PP_0651 at 758.764 kb on - strand, within PP_0651 at 758.881 kb on + strand, within PP_0651 at 758.881 kb on + strand, within PP_0651 at 758.881 kb on + strand, within PP_0651 at 758.883 kb on + strand, within PP_0651 at 758.883 kb on + strand, within PP_0651 at 758.883 kb on + strand, within PP_0651 at 758.884 kb on - strand, within PP_0651 at 758.913 kb on + strand, within PP_0651 at 758.913 kb on + strand, within PP_0651 at 758.913 kb on + strand, within PP_0651 at 758.913 kb on + strand, within PP_0651 at 758.913 kb on + strand, within PP_0651 at 758.914 kb on - strand, within PP_0651 at 758.914 kb on - strand, within PP_0651 at 758.914 kb on - strand, within PP_0651 at 758.914 kb on - strand, within PP_0651 at 758.914 kb on - strand, within PP_0651 at 758.948 kb on + strand, within PP_0651 at 758.948 kb on + strand, within PP_0651 at 759.011 kb on - strand at 759.026 kb on + strand at 759.026 kb on + strand at 759.027 kb on - strand at 759.042 kb on + strand at 759.042 kb on + strand at 759.047 kb on + strand at 759.048 kb on - strand at 759.048 kb on - strand at 759.070 kb on - strand at 759.070 kb on - strand at 759.092 kb on + strand at 759.092 kb on + strand at 759.092 kb on + strand at 759.092 kb on + strand at 759.093 kb on - strand at 759.093 kb on - strand at 759.093 kb on - strand at 759.093 kb on - strand at 759.096 kb on + strand at 759.096 kb on + strand at 759.096 kb on + strand at 759.097 kb on - strand at 759.097 kb on - strand at 759.118 kb on + strand at 759.118 kb on + strand at 759.119 kb on - strand at 759.119 kb on - strand at 759.202 kb on + strand at 759.226 kb on + strand at 759.276 kb on + strand at 759.277 kb on - strand at 759.288 kb on + strand at 759.288 kb on + strand at 759.288 kb on + strand at 759.289 kb on - strand at 759.294 kb on + strand at 759.294 kb on + strand at 759.295 kb on - strand at 759.310 kb on + strand at 759.310 kb on + strand at 759.310 kb on + strand at 759.310 kb on + strand at 759.311 kb on - strand at 759.313 kb on + strand at 759.313 kb on + strand at 759.374 kb on + strand at 759.375 kb on - strand at 759.375 kb on - strand at 759.396 kb on + strand at 759.419 kb on + strand at 759.434 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-1-butanol 0.25 vol% (C) remove 757,379 - +0.5 757,412 + -2.2 757,440 + PP_0648 0.13 -0.5 757,539 + PP_0648 0.35 -0.6 757,540 - PP_0648 0.35 +1.0 757,594 + PP_0648 0.47 +2.4 757,595 - PP_0648 0.47 +0.8 757,606 + PP_0648 0.50 +0.8 757,606 + PP_0648 0.50 +1.3 757,607 - PP_0648 0.50 -1.9 757,607 - PP_0648 0.50 +1.1 757,607 - PP_0648 0.50 -2.7 757,607 - PP_0648 0.50 +0.1 757,614 - PP_0648 0.52 +1.6 757,614 - PP_0648 0.52 -0.6 757,614 - PP_0648 0.52 +0.8 757,633 + PP_0648 0.56 -2.0 757,634 - PP_0648 0.56 +1.6 757,637 + PP_0648 0.57 +1.4 757,637 + PP_0648 0.57 +0.2 757,637 + PP_0648 0.57 +1.2 757,637 + PP_0648 0.57 -0.8 757,637 + PP_0648 0.57 +0.9 757,637 + PP_0648 0.57 -1.0 757,637 + PP_0648 0.57 +3.3 757,638 - PP_0648 0.57 -2.8 757,638 - PP_0648 0.57 +1.0 757,638 - PP_0648 0.57 -1.1 757,638 - PP_0648 0.57 +0.8 757,638 - PP_0648 0.57 +1.5 757,638 - PP_0648 0.57 +1.5 757,638 - PP_0648 0.57 -0.6 757,638 - PP_0648 0.57 +0.1 757,638 - PP_0648 0.57 +0.2 757,639 + PP_0648 0.57 -1.5 757,639 + PP_0648 0.57 +1.6 757,640 - PP_0648 0.57 -1.3 757,640 - PP_0648 0.57 +0.7 757,641 - PP_0648 0.57 +0.3 757,673 + PP_0648 0.64 -1.2 757,674 - PP_0648 0.65 -0.8 757,674 - PP_0648 0.65 +0.2 757,693 + PP_0648 0.69 +1.0 757,756 + PP_0648 0.83 +0.2 757,756 + PP_0648 0.83 +0.6 757,757 - PP_0648 0.83 -2.6 757,757 - PP_0648 0.83 +1.3 757,767 + PP_0648 0.85 +0.1 757,767 + PP_0648 0.85 -3.6 757,803 - -1.8 757,838 + -0.4 757,880 + -1.8 757,880 + -2.3 757,880 + -1.3 757,900 + -0.3 757,900 + -2.3 757,900 + +1.4 757,947 + +0.4 757,947 + +1.3 757,948 - +0.0 757,948 - -1.6 757,948 - -1.6 757,948 - +0.1 757,948 - +1.1 757,980 + PP_0649 0.14 +0.4 757,998 + PP_0649 0.18 +0.5 757,998 + PP_0649 0.18 -1.1 757,999 - PP_0649 0.19 +1.3 758,087 - PP_0649 0.40 +1.1 758,087 - PP_0649 0.40 +0.0 758,189 - PP_0649 0.65 +0.2 758,189 - PP_0649 0.65 +0.2 758,306 - +2.7 758,330 + +1.6 758,331 - -0.1 758,331 - +0.5 758,331 - -1.2 758,331 - -0.7 758,340 + +0.2 758,340 + -0.8 758,341 - +0.2 758,341 - +0.4 758,358 - -2.6 758,384 + PP_0650 0.22 -2.5 758,384 + PP_0650 0.22 -2.0 758,385 - PP_0650 0.23 -0.6 758,385 - PP_0650 0.23 -0.3 758,387 + PP_0650 0.24 -2.4 758,387 + PP_0650 0.24 +1.1 758,388 - PP_0650 0.25 -2.0 758,388 - PP_0650 0.25 -1.1 758,388 - PP_0650 0.25 -2.8 758,388 - PP_0650 0.25 +1.2 758,446 - PP_0650 0.77 -2.7 758,446 - PP_0650 0.77 +0.1 758,451 + PP_0650 0.82 -1.3 758,451 + PP_0650 0.82 +0.4 758,451 + PP_0650 0.82 +1.5 758,452 - PP_0650 0.83 -2.9 758,452 - PP_0650 0.83 -3.0 758,486 + -2.3 758,486 + -0.7 758,486 + +2.6 758,514 + -0.7 758,514 + +1.2 758,515 - +1.2 758,538 + +0.8 758,539 - -1.2 758,539 - +0.6 758,539 - -0.2 758,560 - +0.7 758,562 - +0.2 758,626 - PP_0651 0.10 +0.2 758,626 - PP_0651 0.10 -1.0 758,638 + PP_0651 0.13 +0.7 758,638 + PP_0651 0.13 -0.7 758,639 - PP_0651 0.13 -1.0 758,640 + PP_0651 0.14 -0.3 758,640 + PP_0651 0.14 -2.6 758,737 + PP_0651 0.35 -1.1 758,738 - +4.0 758,757 + PP_0651 0.40 +1.0 758,757 + PP_0651 0.40 +0.9 758,758 - PP_0651 0.40 +0.8 758,758 - PP_0651 0.40 +0.6 758,763 + PP_0651 0.41 +0.7 758,764 - PP_0651 0.41 -0.9 758,881 + PP_0651 0.67 -0.2 758,881 + PP_0651 0.67 -0.3 758,881 + PP_0651 0.67 -0.3 758,883 + PP_0651 0.68 +2.7 758,883 + PP_0651 0.68 +1.0 758,883 + PP_0651 0.68 -3.7 758,884 - PP_0651 0.68 -0.7 758,913 + PP_0651 0.74 -4.7 758,913 + PP_0651 0.74 -2.7 758,913 + PP_0651 0.74 +1.9 758,913 + PP_0651 0.74 -0.3 758,913 + PP_0651 0.74 -0.9 758,914 - PP_0651 0.74 -1.2 758,914 - PP_0651 0.74 -2.0 758,914 - PP_0651 0.74 -0.7 758,914 - PP_0651 0.74 +0.2 758,914 - PP_0651 0.74 +0.8 758,948 + PP_0651 0.82 +0.8 758,948 + PP_0651 0.82 -0.5 759,011 - +2.7 759,026 + +0.8 759,026 + -1.0 759,027 - +1.0 759,042 + +0.2 759,042 + -0.3 759,047 + +0.1 759,048 - +1.1 759,048 - +0.1 759,070 - -3.2 759,070 - +0.7 759,092 + -1.4 759,092 + -0.6 759,092 + -1.3 759,092 + +2.0 759,093 - -1.7 759,093 - -2.3 759,093 - +0.5 759,093 - +0.5 759,096 + -1.1 759,096 + -0.7 759,096 + +0.2 759,097 - -0.5 759,097 - -4.1 759,118 + -1.9 759,118 + +1.0 759,119 - -3.5 759,119 - +1.9 759,202 + +0.9 759,226 + +0.8 759,276 + +1.3 759,277 - -0.3 759,288 + -0.6 759,288 + +0.6 759,288 + +3.3 759,289 - -1.7 759,294 + +0.5 759,294 + +3.5 759,295 - -0.2 759,310 + -0.7 759,310 + +1.2 759,310 + -1.7 759,310 + +2.6 759,311 - +0.7 759,313 + -3.9 759,313 + -1.8 759,374 + +1.2 759,375 - -0.5 759,375 - -0.6 759,396 + +0.8 759,419 + -0.1 759,434 - -0.4
Or see this region's nucleotide sequence