Experiment: 3-methyl-1-butanol 0.25 vol% (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0364 and PP_0365 overlap by 8 nucleotides PP_0365 and PP_0366 are separated by 10 nucleotides PP_0366 and PP_0367 are separated by 173 nucleotides PP_0367 and PP_0368 are separated by 287 nucleotides
PP_0364: PP_0364 - pimeloyl-[acp] methyl ester esterase, at 442,285 to 443,016
_0364
PP_0365: PP_0365 - Malonyl-[acyl-carrier protein] O-methyltransferase, at 443,009 to 443,827
_0365
PP_0366: PP_0366 - dethiobiotin synthetase, at 443,838 to 444,518
_0366
PP_0367: PP_0367 - conserved protein of unknown function, at 444,692 to 445,027
_0367
PP_0368: PP_0368 - putative Acyl-CoA dehydrogenase, at 445,315 to 447,120
_0368
Position (kb) 443
444
445 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 442.862 kb on + strand, within PP_0364 at 442.863 kb on - strand, within PP_0364 at 442.911 kb on - strand, within PP_0364 at 442.911 kb on - strand, within PP_0364 at 442.957 kb on + strand at 443.097 kb on - strand, within PP_0365 at 443.127 kb on + strand, within PP_0365 at 443.312 kb on + strand, within PP_0365 at 443.312 kb on + strand, within PP_0365 at 443.313 kb on - strand, within PP_0365 at 443.455 kb on - strand, within PP_0365 at 443.455 kb on - strand, within PP_0365 at 443.535 kb on + strand, within PP_0365 at 443.536 kb on - strand, within PP_0365 at 443.536 kb on - strand, within PP_0365 at 443.536 kb on - strand, within PP_0365 at 443.561 kb on + strand, within PP_0365 at 443.562 kb on - strand, within PP_0365 at 443.562 kb on - strand, within PP_0365 at 443.562 kb on - strand, within PP_0365 at 443.622 kb on + strand, within PP_0365 at 443.622 kb on + strand, within PP_0365 at 443.623 kb on - strand, within PP_0365 at 443.623 kb on - strand, within PP_0365 at 443.623 kb on - strand, within PP_0365 at 443.623 kb on - strand, within PP_0365 at 443.623 kb on - strand, within PP_0365 at 443.623 kb on - strand, within PP_0365 at 443.623 kb on - strand, within PP_0365 at 443.623 kb on - strand, within PP_0365 at 443.623 kb on - strand, within PP_0365 at 443.623 kb on - strand, within PP_0365 at 443.623 kb on - strand, within PP_0365 at 443.747 kb on + strand at 443.747 kb on + strand at 443.747 kb on + strand at 443.747 kb on + strand at 443.747 kb on + strand at 443.748 kb on - strand at 443.748 kb on - strand at 443.748 kb on - strand at 443.748 kb on - strand at 443.786 kb on + strand at 443.786 kb on + strand at 443.786 kb on + strand at 443.787 kb on - strand at 443.798 kb on + strand at 443.798 kb on + strand at 443.798 kb on + strand at 443.798 kb on + strand at 443.798 kb on + strand at 443.798 kb on + strand at 443.799 kb on - strand at 443.799 kb on - strand at 443.799 kb on - strand at 443.799 kb on - strand at 443.799 kb on - strand at 443.799 kb on - strand at 443.826 kb on - strand at 444.043 kb on - strand, within PP_0366 at 444.043 kb on - strand, within PP_0366 at 444.077 kb on + strand, within PP_0366 at 444.077 kb on + strand, within PP_0366 at 444.078 kb on - strand, within PP_0366 at 444.080 kb on - strand, within PP_0366 at 444.184 kb on + strand, within PP_0366 at 444.184 kb on + strand, within PP_0366 at 444.185 kb on - strand, within PP_0366 at 444.185 kb on - strand, within PP_0366 at 444.185 kb on - strand, within PP_0366 at 444.517 kb on - strand at 444.517 kb on - strand at 444.517 kb on - strand at 444.517 kb on - strand at 444.559 kb on + strand at 444.594 kb on - strand at 444.630 kb on + strand at 444.631 kb on - strand at 444.659 kb on + strand at 444.659 kb on + strand at 444.679 kb on + strand at 444.690 kb on - strand at 444.758 kb on + strand, within PP_0367 at 444.758 kb on + strand, within PP_0367 at 444.758 kb on + strand, within PP_0367 at 444.758 kb on + strand, within PP_0367 at 444.758 kb on + strand, within PP_0367 at 444.759 kb on - strand, within PP_0367 at 444.759 kb on - strand, within PP_0367 at 444.850 kb on + strand, within PP_0367 at 445.019 kb on + strand at 445.019 kb on + strand at 445.019 kb on + strand at 445.020 kb on - strand at 445.020 kb on - strand at 445.020 kb on - strand at 445.030 kb on - strand at 445.030 kb on - strand at 445.045 kb on + strand at 445.045 kb on + strand at 445.046 kb on - strand at 445.064 kb on + strand at 445.065 kb on - strand at 445.065 kb on - strand at 445.065 kb on - strand at 445.145 kb on + strand at 445.145 kb on + strand at 445.206 kb on - strand at 445.239 kb on - strand at 445.300 kb on + strand at 445.325 kb on - strand at 445.375 kb on + strand at 445.387 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-1-butanol 0.25 vol% (C) remove 442,862 + PP_0364 0.79 -3.4 442,863 - PP_0364 0.79 -1.6 442,911 - PP_0364 0.86 -3.3 442,911 - PP_0364 0.86 -2.4 442,957 + -1.9 443,097 - PP_0365 0.11 -2.4 443,127 + PP_0365 0.14 -1.4 443,312 + PP_0365 0.37 -3.5 443,312 + PP_0365 0.37 -4.2 443,313 - PP_0365 0.37 -2.3 443,455 - PP_0365 0.54 -3.0 443,455 - PP_0365 0.54 -0.9 443,535 + PP_0365 0.64 -2.1 443,536 - PP_0365 0.64 -1.2 443,536 - PP_0365 0.64 -1.2 443,536 - PP_0365 0.64 -2.4 443,561 + PP_0365 0.67 -1.6 443,562 - PP_0365 0.68 -4.6 443,562 - PP_0365 0.68 -2.4 443,562 - PP_0365 0.68 -1.6 443,622 + PP_0365 0.75 -2.5 443,622 + PP_0365 0.75 -3.4 443,623 - PP_0365 0.75 +0.1 443,623 - PP_0365 0.75 -3.2 443,623 - PP_0365 0.75 -4.5 443,623 - PP_0365 0.75 -1.6 443,623 - PP_0365 0.75 -1.3 443,623 - PP_0365 0.75 -1.2 443,623 - PP_0365 0.75 -1.9 443,623 - PP_0365 0.75 -3.0 443,623 - PP_0365 0.75 -1.7 443,623 - PP_0365 0.75 -3.0 443,623 - PP_0365 0.75 -3.3 443,747 + -1.3 443,747 + -3.6 443,747 + -3.4 443,747 + -4.0 443,747 + -2.6 443,748 - -0.8 443,748 - -3.0 443,748 - -3.4 443,748 - -4.3 443,786 + -4.4 443,786 + -1.1 443,786 + -2.6 443,787 - -2.6 443,798 + -2.8 443,798 + -2.3 443,798 + -3.2 443,798 + -2.6 443,798 + -2.5 443,798 + -1.7 443,799 - -4.0 443,799 - -3.8 443,799 - -3.1 443,799 - -3.4 443,799 - -4.2 443,799 - -2.6 443,826 - -1.6 444,043 - PP_0366 0.30 -2.7 444,043 - PP_0366 0.30 -4.1 444,077 + PP_0366 0.35 -3.3 444,077 + PP_0366 0.35 -2.8 444,078 - PP_0366 0.35 -0.8 444,080 - PP_0366 0.36 -4.4 444,184 + PP_0366 0.51 -2.2 444,184 + PP_0366 0.51 -3.4 444,185 - PP_0366 0.51 -3.3 444,185 - PP_0366 0.51 -2.3 444,185 - PP_0366 0.51 -3.7 444,517 - -1.0 444,517 - -1.8 444,517 - +0.4 444,517 - +0.7 444,559 + -0.3 444,594 - +0.4 444,630 + +0.5 444,631 - +1.2 444,659 + -0.2 444,659 + -3.2 444,679 + +0.5 444,690 - +0.7 444,758 + PP_0367 0.20 +0.1 444,758 + PP_0367 0.20 +0.2 444,758 + PP_0367 0.20 -2.7 444,758 + PP_0367 0.20 -0.3 444,758 + PP_0367 0.20 +0.4 444,759 - PP_0367 0.20 -0.0 444,759 - PP_0367 0.20 -1.5 444,850 + PP_0367 0.47 -3.1 445,019 + +0.2 445,019 + +2.7 445,019 + +0.4 445,020 - +0.8 445,020 - -3.2 445,020 - -0.6 445,030 - +1.6 445,030 - +0.9 445,045 + +0.8 445,045 + -0.4 445,046 - +0.6 445,064 + +0.5 445,065 - -0.4 445,065 - +2.0 445,065 - -1.4 445,145 + -2.2 445,145 + -1.8 445,206 - -1.4 445,239 - -0.5 445,300 + -4.5 445,325 - -2.8 445,375 + -2.2 445,387 + +0.3
Or see this region's nucleotide sequence