Experiment: 3-methyl-1-butanol 0.1 vol% (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0831 and PP_t68 are separated by 330 nucleotides PP_t68 and PP_0832 are separated by 105 nucleotides
PP_0831: PP_0831 - hypothetical protein, at 967,989 to 968,567
_0831
PP_t68: PP_t68 - tRNA-Leu, at 968,898 to 968,982
_t68
PP_0832: PP_0832 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 969,088 to 970,137
_0832
Position (kb) 968
969 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 967.956 kb on + strand at 967.956 kb on + strand at 967.956 kb on + strand at 967.956 kb on + strand at 967.956 kb on + strand at 967.957 kb on - strand at 968.065 kb on + strand, within PP_0831 at 968.071 kb on + strand, within PP_0831 at 968.071 kb on + strand, within PP_0831 at 968.072 kb on - strand, within PP_0831 at 968.120 kb on + strand, within PP_0831 at 968.121 kb on - strand, within PP_0831 at 968.270 kb on - strand, within PP_0831 at 968.288 kb on + strand, within PP_0831 at 968.389 kb on + strand, within PP_0831 at 968.389 kb on + strand, within PP_0831 at 968.389 kb on + strand, within PP_0831 at 968.389 kb on + strand, within PP_0831 at 968.436 kb on + strand, within PP_0831 at 968.436 kb on + strand, within PP_0831 at 968.436 kb on + strand, within PP_0831 at 968.437 kb on - strand, within PP_0831 at 968.581 kb on + strand at 968.582 kb on - strand at 968.599 kb on + strand at 968.599 kb on + strand at 968.600 kb on - strand at 968.764 kb on + strand at 968.791 kb on - strand at 968.791 kb on - strand at 968.802 kb on - strand at 968.802 kb on - strand at 968.876 kb on + strand at 968.877 kb on - strand at 968.877 kb on - strand at 969.055 kb on - strand at 969.232 kb on + strand, within PP_0832 at 969.232 kb on + strand, within PP_0832 at 969.233 kb on - strand, within PP_0832 at 969.395 kb on + strand, within PP_0832 at 969.396 kb on - strand, within PP_0832 at 969.529 kb on + strand, within PP_0832 at 969.529 kb on + strand, within PP_0832 at 969.529 kb on + strand, within PP_0832 at 969.531 kb on + strand, within PP_0832 at 969.532 kb on - strand, within PP_0832 at 969.569 kb on - strand, within PP_0832 at 969.753 kb on + strand, within PP_0832
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-1-butanol 0.1 vol% (C) remove 967,956 + -1.0 967,956 + -0.5 967,956 + +1.2 967,956 + +0.2 967,956 + +0.5 967,957 - +0.9 968,065 + PP_0831 0.13 -1.5 968,071 + PP_0831 0.14 -0.7 968,071 + PP_0831 0.14 +0.1 968,072 - PP_0831 0.14 +0.1 968,120 + PP_0831 0.23 +0.4 968,121 - PP_0831 0.23 +0.1 968,270 - PP_0831 0.49 +0.3 968,288 + PP_0831 0.52 +0.6 968,389 + PP_0831 0.69 -0.7 968,389 + PP_0831 0.69 -1.6 968,389 + PP_0831 0.69 +1.7 968,389 + PP_0831 0.69 -0.5 968,436 + PP_0831 0.77 +0.8 968,436 + PP_0831 0.77 -0.4 968,436 + PP_0831 0.77 +0.1 968,437 - PP_0831 0.77 +0.8 968,581 + +1.6 968,582 - +0.7 968,599 + +0.9 968,599 + -2.0 968,600 - +0.9 968,764 + +0.4 968,791 - +0.3 968,791 - -0.1 968,802 - -0.6 968,802 - -0.9 968,876 + +0.7 968,877 - +0.6 968,877 - +1.7 969,055 - -2.3 969,232 + PP_0832 0.14 -1.2 969,232 + PP_0832 0.14 -0.5 969,233 - PP_0832 0.14 -1.0 969,395 + PP_0832 0.29 -0.1 969,396 - PP_0832 0.29 +0.2 969,529 + PP_0832 0.42 -3.2 969,529 + PP_0832 0.42 -3.1 969,529 + PP_0832 0.42 -4.2 969,531 + PP_0832 0.42 -1.9 969,532 - PP_0832 0.42 -0.5 969,569 - PP_0832 0.46 -2.5 969,753 + PP_0832 0.63 -2.0
Or see this region's nucleotide sequence