Strain Fitness in Pseudomonas putida KT2440 around PP_5291

Experiment: 3-methyl-1-butanol 0.1 vol% (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 0.1 vol% (C)
6,039,180	+				-1.8
6,039,180	+				-1.1
6,039,180	+				+0.1
6,039,180	+				-0.4
6,039,180	+				-2.8
6,039,180	+				-0.6
6,039,180	+				-1.8
6,039,180	+				-0.9
6,039,245	-				-0.9
6,040,773	+				-0.8
6,040,773	+				-2.4
6,040,773	+				-1.8
6,040,773	+				-0.5
6,040,774	-				-1.4
6,040,774	-				-1.7
6,040,774	-				-1.3
6,040,810	+				+0.3
6,040,810	+				-3.4
6,040,811	-				+0.2
6,040,887	+		PP_5293	0.21	+1.4
6,040,887	+		PP_5293	0.21	-0.6
6,040,888	-		PP_5293	0.21	-0.6
6,040,888	-		PP_5293	0.21	+0.3
6,040,888	-		PP_5293	0.21	-0.4