Strain Fitness in Pseudomonas putida KT2440 around PP_5132

Experiment: 3-methyl-1-butanol 0.1 vol% (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 0.1 vol% (C)
5,854,723	+		PP_5131	0.53	-1.9
5,854,723	+		PP_5131	0.53	-0.5
5,854,724	-		PP_5131	0.53	-0.7
5,855,065	+		PP_5131	0.78	+1.6
5,855,066	-		PP_5131	0.78	-3.2
5,855,457	-				-1.6
5,856,014	-				-2.6
5,856,014	-				-3.0
5,856,014	-				+0.9
5,856,014	-				-1.3
5,856,032	-				-1.3
5,856,199	-				-0.8
5,856,199	-				-0.6
5,856,199	-				+0.3
5,856,435	+		PP_5133	0.26	-0.4
5,856,435	+		PP_5133	0.26	+0.3
5,856,435	+		PP_5133	0.26	-1.1
5,856,436	-		PP_5133	0.26	+1.2
5,856,436	-		PP_5133	0.26	+0.7
5,856,508	-		PP_5133	0.31	+1.1
5,856,612	+		PP_5133	0.39	-1.0
5,856,657	+		PP_5133	0.42	+0.4
5,856,657	+		PP_5133	0.42	+0.0
5,856,657	+		PP_5133	0.42	+0.6
5,856,658	-		PP_5133	0.42	+0.6
5,856,658	-		PP_5133	0.42	+0.3
5,856,881	+		PP_5133	0.58	-0.9
5,856,882	-		PP_5133	0.58	-1.0
5,856,882	-		PP_5133	0.58	+0.7
5,856,882	-		PP_5133	0.58	-0.4
5,856,978	-		PP_5133	0.65	+0.2