Strain Fitness in Pseudomonas putida KT2440 around PP_2154

Experiment: 3-methyl-1-butanol 0.1 vol% (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 0.1 vol% (C)
2,460,279	+				+2.0
2,460,280	-				+1.6
2,460,388	+		PP_2153	0.13	+2.0
2,460,389	-		PP_2153	0.14	-1.2
2,460,389	-		PP_2153	0.14	-1.0
2,460,717	+		PP_2153	0.82	+2.0
2,460,717	+		PP_2153	0.82	+1.7
2,460,840	+				+2.0
2,460,840	+				+2.5
2,460,840	+				+2.6
2,460,871	+				+2.3
2,460,897	+				+2.9
2,460,897	+				+1.2
2,462,244	+				+1.4
2,462,244	+				-0.8