Experiment: 3-methyl-1-butanol 0.1 vol% (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_1073 and PP_1074 are separated by 216 nucleotides PP_1074 and PP_1075 are separated by 101 nucleotides
PP_1073: PP_1073 - glycerol-3-phosphate dehydrogenase (aerobic), at 1,231,168 to 1,232,712
_1073
PP_1074: PP_1074 - DNA-binding transcriptional repressor - GlpR-glycerol-3-phosphate, at 1,232,929 to 1,233,684
_1074
PP_1075: PP_1075 - glycerol kinase, at 1,233,786 to 1,235,285
_1075
Position (kb) 1232
1233
1234 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 1232.974 kb on - strand at 1233.322 kb on - strand, within PP_1074 at 1233.322 kb on - strand, within PP_1074 at 1233.431 kb on - strand, within PP_1074 at 1233.485 kb on + strand, within PP_1074 at 1233.512 kb on + strand, within PP_1074 at 1233.513 kb on - strand, within PP_1074 at 1233.629 kb on + strand at 1233.630 kb on - strand at 1233.630 kb on - strand at 1233.730 kb on - strand at 1233.750 kb on + strand at 1233.784 kb on + strand at 1233.784 kb on + strand at 1233.784 kb on + strand at 1233.784 kb on + strand at 1233.785 kb on - strand at 1233.785 kb on - strand at 1233.785 kb on - strand at 1233.785 kb on - strand at 1233.785 kb on - strand at 1233.844 kb on + strand at 1233.844 kb on + strand at 1233.844 kb on + strand at 1233.844 kb on + strand at 1233.958 kb on + strand, within PP_1075 at 1233.959 kb on - strand, within PP_1075 at 1234.136 kb on - strand, within PP_1075 at 1234.173 kb on + strand, within PP_1075 at 1234.174 kb on - strand, within PP_1075 at 1234.174 kb on - strand, within PP_1075 at 1234.216 kb on + strand, within PP_1075 at 1234.216 kb on + strand, within PP_1075 at 1234.265 kb on - strand, within PP_1075 at 1234.359 kb on - strand, within PP_1075 at 1234.359 kb on - strand, within PP_1075 at 1234.359 kb on - strand, within PP_1075 at 1234.393 kb on + strand, within PP_1075 at 1234.394 kb on - strand, within PP_1075 at 1234.394 kb on - strand, within PP_1075 at 1234.394 kb on - strand, within PP_1075 at 1234.498 kb on + strand, within PP_1075 at 1234.499 kb on - strand, within PP_1075 at 1234.499 kb on - strand, within PP_1075 at 1234.499 kb on - strand, within PP_1075 at 1234.502 kb on + strand, within PP_1075 at 1234.502 kb on + strand, within PP_1075 at 1234.502 kb on + strand, within PP_1075 at 1234.502 kb on + strand, within PP_1075 at 1234.503 kb on - strand, within PP_1075 at 1234.503 kb on - strand, within PP_1075 at 1234.503 kb on - strand, within PP_1075 at 1234.503 kb on - strand, within PP_1075 at 1234.503 kb on - strand, within PP_1075 at 1234.503 kb on - strand, within PP_1075 at 1234.503 kb on - strand, within PP_1075 at 1234.581 kb on + strand, within PP_1075 at 1234.581 kb on + strand, within PP_1075 at 1234.582 kb on - strand, within PP_1075 at 1234.604 kb on - strand, within PP_1075
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-1-butanol 0.1 vol% (C) remove 1,232,974 - +1.5 1,233,322 - PP_1074 0.52 +1.5 1,233,322 - PP_1074 0.52 +0.2 1,233,431 - PP_1074 0.66 +2.1 1,233,485 + PP_1074 0.74 +1.3 1,233,512 + PP_1074 0.77 -0.4 1,233,513 - PP_1074 0.77 +0.3 1,233,629 + +0.9 1,233,630 - +1.5 1,233,630 - -0.1 1,233,730 - -0.2 1,233,750 + +0.1 1,233,784 + -0.6 1,233,784 + -3.0 1,233,784 + -1.1 1,233,784 + -3.4 1,233,785 - -1.4 1,233,785 - -2.7 1,233,785 - -4.0 1,233,785 - -2.3 1,233,785 - -1.8 1,233,844 + -2.2 1,233,844 + -1.7 1,233,844 + -2.1 1,233,844 + -2.9 1,233,958 + PP_1075 0.11 -4.1 1,233,959 - PP_1075 0.12 -3.0 1,234,136 - PP_1075 0.23 -2.1 1,234,173 + PP_1075 0.26 -1.1 1,234,174 - PP_1075 0.26 -2.0 1,234,174 - PP_1075 0.26 -2.6 1,234,216 + PP_1075 0.29 -0.4 1,234,216 + PP_1075 0.29 -2.5 1,234,265 - PP_1075 0.32 -3.0 1,234,359 - PP_1075 0.38 -2.3 1,234,359 - PP_1075 0.38 -0.6 1,234,359 - PP_1075 0.38 -2.7 1,234,393 + PP_1075 0.40 -1.0 1,234,394 - PP_1075 0.41 -2.6 1,234,394 - PP_1075 0.41 -2.0 1,234,394 - PP_1075 0.41 +0.0 1,234,498 + PP_1075 0.47 -2.1 1,234,499 - PP_1075 0.48 -0.9 1,234,499 - PP_1075 0.48 -2.2 1,234,499 - PP_1075 0.48 -1.2 1,234,502 + PP_1075 0.48 -2.3 1,234,502 + PP_1075 0.48 -0.7 1,234,502 + PP_1075 0.48 -2.7 1,234,502 + PP_1075 0.48 -3.7 1,234,503 - PP_1075 0.48 -2.0 1,234,503 - PP_1075 0.48 -1.7 1,234,503 - PP_1075 0.48 +0.4 1,234,503 - PP_1075 0.48 -1.3 1,234,503 - PP_1075 0.48 -3.1 1,234,503 - PP_1075 0.48 -3.5 1,234,503 - PP_1075 0.48 +0.3 1,234,581 + PP_1075 0.53 -1.5 1,234,581 + PP_1075 0.53 -0.6 1,234,582 - PP_1075 0.53 -2.3 1,234,604 - PP_1075 0.55 -2.5
Or see this region's nucleotide sequence