Strain Fitness in Pseudomonas putida KT2440 around PP_1023

Experiment: 3-methyl-1-butanol 0.1 vol% (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 0.1 vol% (C)
1,166,141	+		PP_1022	0.36	+2.4
1,166,242	+		PP_1022	0.43	+0.4
1,166,471	+		PP_1022	0.58	+1.3
1,166,471	+		PP_1022	0.58	-2.6
1,166,582	-		PP_1022	0.66	-0.6
1,166,681	+		PP_1022	0.72	-2.5
1,166,681	+		PP_1022	0.72	-1.5
1,166,681	+		PP_1022	0.72	-1.8
1,166,681	+		PP_1022	0.72	+2.3
1,166,681	+		PP_1022	0.72	+3.3
1,166,716	+		PP_1022	0.75	+0.3
1,166,870	+		PP_1022	0.85	+1.6
1,166,870	+		PP_1022	0.85	-0.1
1,166,871	-		PP_1022	0.85	-0.9
1,166,981	-				+1.7
1,166,981	-				+0.7
1,166,981	-				+0.1
1,167,079	+				-1.8
1,168,501	-				-0.2
1,168,547	+				-0.6
1,168,547	+				-3.5
1,168,548	-				-0.9
1,168,581	-				-0.1
1,168,592	+				+2.3
1,168,641	-				-2.3
1,168,643	+				-0.8
1,168,643	+				+0.8
1,168,644	-				-0.5
1,168,644	-				-0.5
1,168,644	-				+0.1