Experiment: 3-methyl-1-butanol 0.1 vol% (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0508 and PP_0509 are separated by 130 nucleotides PP_0509 and PP_0510 are separated by 151 nucleotides PP_0510 and PP_0511 are separated by 31 nucleotides PP_0511 and PP_0512 are separated by 0 nucleotides
PP_0508: PP_0508 - conserved exported protein of unknown function, at 596,864 to 597,445
_0508
PP_0509: PP_0509 - conserved protein of unknown function, at 597,576 to 597,920
_0509
PP_0510: PP_0510 - Thioredoxin, at 598,072 to 598,944
_0510
PP_0511: PP_0511 - putative methyltransferase, at 598,976 to 599,635
_0511
PP_0512: PP_0512 - hypothetical protein, at 599,636 to 600,043
_0512
Position (kb) 598
599 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 597.295 kb on + strand, within PP_0508 at 597.327 kb on - strand, within PP_0508 at 597.630 kb on - strand, within PP_0509 at 597.630 kb on - strand, within PP_0509 at 597.630 kb on - strand, within PP_0509 at 597.630 kb on - strand, within PP_0509 at 597.679 kb on + strand, within PP_0509 at 597.904 kb on - strand at 597.904 kb on - strand at 598.192 kb on - strand, within PP_0510 at 598.232 kb on + strand, within PP_0510 at 598.233 kb on - strand, within PP_0510 at 598.311 kb on + strand, within PP_0510 at 598.311 kb on + strand, within PP_0510 at 598.466 kb on + strand, within PP_0510 at 598.466 kb on + strand, within PP_0510 at 598.516 kb on + strand, within PP_0510 at 598.517 kb on - strand, within PP_0510 at 598.606 kb on + strand, within PP_0510 at 598.606 kb on + strand, within PP_0510 at 598.606 kb on + strand, within PP_0510 at 598.607 kb on - strand, within PP_0510 at 598.607 kb on - strand, within PP_0510 at 598.607 kb on - strand, within PP_0510 at 598.607 kb on - strand, within PP_0510 at 598.607 kb on - strand, within PP_0510 at 598.926 kb on - strand at 598.926 kb on - strand at 598.966 kb on + strand at 598.966 kb on + strand at 598.967 kb on - strand at 598.977 kb on + strand at 598.978 kb on - strand at 598.978 kb on - strand at 598.979 kb on + strand at 598.979 kb on + strand at 598.979 kb on + strand at 598.980 kb on - strand at 598.980 kb on - strand at 598.980 kb on - strand at 598.980 kb on - strand at 599.001 kb on + strand at 599.079 kb on + strand, within PP_0511 at 599.080 kb on - strand, within PP_0511 at 599.080 kb on - strand, within PP_0511 at 599.092 kb on + strand, within PP_0511 at 599.179 kb on - strand, within PP_0511 at 599.179 kb on - strand, within PP_0511 at 599.241 kb on + strand, within PP_0511 at 599.242 kb on - strand, within PP_0511 at 599.242 kb on - strand, within PP_0511 at 599.242 kb on - strand, within PP_0511 at 599.246 kb on + strand, within PP_0511 at 599.246 kb on + strand, within PP_0511 at 599.246 kb on + strand, within PP_0511 at 599.247 kb on - strand, within PP_0511 at 599.425 kb on - strand, within PP_0511 at 599.466 kb on + strand, within PP_0511 at 599.543 kb on + strand, within PP_0511 at 599.544 kb on - strand, within PP_0511 at 599.637 kb on + strand at 599.637 kb on + strand at 599.637 kb on + strand at 599.638 kb on - strand at 599.638 kb on - strand at 599.638 kb on - strand at 599.800 kb on - strand, within PP_0512 at 599.800 kb on - strand, within PP_0512 at 599.943 kb on + strand, within PP_0512
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-1-butanol 0.1 vol% (C) remove 597,295 + PP_0508 0.74 -0.2 597,327 - PP_0508 0.80 -0.3 597,630 - PP_0509 0.16 -2.0 597,630 - PP_0509 0.16 +0.8 597,630 - PP_0509 0.16 +1.2 597,630 - PP_0509 0.16 -0.8 597,679 + PP_0509 0.30 -0.4 597,904 - -1.1 597,904 - -1.3 598,192 - PP_0510 0.14 +0.0 598,232 + PP_0510 0.18 +1.2 598,233 - PP_0510 0.18 +2.6 598,311 + PP_0510 0.27 +0.9 598,311 + PP_0510 0.27 -0.5 598,466 + PP_0510 0.45 +1.5 598,466 + PP_0510 0.45 +1.9 598,516 + PP_0510 0.51 -1.8 598,517 - PP_0510 0.51 +2.2 598,606 + PP_0510 0.61 -0.3 598,606 + PP_0510 0.61 +0.4 598,606 + PP_0510 0.61 +1.2 598,607 - PP_0510 0.61 -0.6 598,607 - PP_0510 0.61 -0.8 598,607 - PP_0510 0.61 +1.1 598,607 - PP_0510 0.61 +2.0 598,607 - PP_0510 0.61 +1.4 598,926 - +0.9 598,926 - +0.2 598,966 + +0.7 598,966 + +0.9 598,967 - -0.1 598,977 + +1.5 598,978 - -0.7 598,978 - +1.5 598,979 + -1.9 598,979 + -1.5 598,979 + -0.5 598,980 - +0.2 598,980 - -1.0 598,980 - +0.6 598,980 - -3.3 599,001 + -0.9 599,079 + PP_0511 0.16 -0.1 599,080 - PP_0511 0.16 +0.6 599,080 - PP_0511 0.16 +0.5 599,092 + PP_0511 0.18 +1.7 599,179 - PP_0511 0.31 -0.4 599,179 - PP_0511 0.31 +0.4 599,241 + PP_0511 0.40 -0.3 599,242 - PP_0511 0.40 +0.6 599,242 - PP_0511 0.40 -0.1 599,242 - PP_0511 0.40 +0.3 599,246 + PP_0511 0.41 -0.9 599,246 + PP_0511 0.41 -1.0 599,246 + PP_0511 0.41 -0.9 599,247 - PP_0511 0.41 -1.5 599,425 - PP_0511 0.68 -3.7 599,466 + PP_0511 0.74 -0.3 599,543 + PP_0511 0.86 +1.3 599,544 - PP_0511 0.86 -0.9 599,637 + +1.1 599,637 + -0.2 599,637 + -0.4 599,638 - +0.9 599,638 - +0.6 599,638 - +1.6 599,800 - PP_0512 0.40 +0.7 599,800 - PP_0512 0.40 -0.7 599,943 + PP_0512 0.75 -1.0
Or see this region's nucleotide sequence