Experiment: 3-methyl-1-butanol 0.1 vol% (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0354 and PP_0355 are separated by 92 nucleotides PP_0355 and PP_0356 are separated by 46 nucleotides PP_0356 and PP_0357 are separated by 449 nucleotides
PP_0354: PP_0354 - CBS domain protein, at 430,376 to 432,313
_0354
PP_0355: PP_0355 - Response regulator, at 432,406 to 432,975
_0355
PP_0356: PP_0356 - malate synthase G, at 433,022 to 435,199
_0356
PP_0357: PP_0357 - ACT domain protein, at 435,649 to 436,167
_0357
Position (kb) 433
434
435
436 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 432.105 kb on + strand, within PP_0354 at 432.105 kb on + strand, within PP_0354 at 432.105 kb on + strand, within PP_0354 at 432.106 kb on - strand, within PP_0354 at 432.106 kb on - strand, within PP_0354 at 432.159 kb on + strand at 432.160 kb on - strand at 432.160 kb on - strand at 432.344 kb on - strand at 432.345 kb on + strand at 432.345 kb on + strand at 432.346 kb on - strand at 432.346 kb on - strand at 432.346 kb on - strand at 432.346 kb on - strand at 432.347 kb on + strand at 432.347 kb on + strand at 432.347 kb on + strand at 432.347 kb on + strand at 432.348 kb on - strand at 432.348 kb on - strand at 432.348 kb on - strand at 432.351 kb on + strand at 432.351 kb on + strand at 432.351 kb on + strand at 432.351 kb on + strand at 432.352 kb on - strand at 432.352 kb on - strand at 432.354 kb on - strand at 432.354 kb on - strand at 432.355 kb on + strand at 432.356 kb on - strand at 432.357 kb on + strand at 432.357 kb on + strand at 432.357 kb on + strand at 432.423 kb on + strand at 432.423 kb on + strand at 432.423 kb on + strand at 432.424 kb on - strand at 432.424 kb on - strand at 432.424 kb on - strand at 432.429 kb on + strand at 432.429 kb on + strand at 432.430 kb on - strand at 432.430 kb on - strand at 432.430 kb on - strand at 432.491 kb on + strand, within PP_0355 at 432.491 kb on + strand, within PP_0355 at 432.491 kb on + strand, within PP_0355 at 432.492 kb on - strand, within PP_0355 at 432.724 kb on + strand, within PP_0355 at 432.725 kb on - strand, within PP_0355 at 432.733 kb on + strand, within PP_0355 at 432.734 kb on - strand, within PP_0355 at 432.744 kb on + strand, within PP_0355 at 432.745 kb on - strand, within PP_0355 at 432.759 kb on + strand, within PP_0355 at 432.993 kb on - strand at 432.993 kb on - strand at 433.023 kb on + strand at 433.023 kb on + strand at 433.023 kb on + strand at 433.023 kb on + strand at 433.023 kb on + strand at 433.023 kb on + strand at 433.024 kb on - strand at 433.024 kb on - strand at 433.024 kb on - strand at 433.024 kb on - strand at 433.110 kb on - strand at 433.110 kb on - strand at 433.171 kb on - strand at 433.526 kb on + strand, within PP_0356 at 433.527 kb on - strand, within PP_0356 at 433.543 kb on - strand, within PP_0356 at 433.894 kb on + strand, within PP_0356 at 434.025 kb on + strand, within PP_0356 at 434.025 kb on + strand, within PP_0356 at 434.025 kb on + strand, within PP_0356 at 434.025 kb on + strand, within PP_0356 at 434.026 kb on - strand, within PP_0356 at 434.026 kb on - strand, within PP_0356 at 434.026 kb on - strand, within PP_0356 at 434.113 kb on + strand, within PP_0356 at 434.113 kb on + strand, within PP_0356 at 434.114 kb on - strand, within PP_0356 at 434.360 kb on + strand, within PP_0356 at 434.721 kb on + strand, within PP_0356 at 434.721 kb on + strand, within PP_0356 at 434.722 kb on - strand, within PP_0356 at 434.772 kb on + strand, within PP_0356 at 434.784 kb on + strand, within PP_0356 at 435.150 kb on + strand at 435.151 kb on - strand at 435.151 kb on - strand at 435.190 kb on - strand at 435.190 kb on - strand at 435.223 kb on - strand at 435.237 kb on + strand at 435.237 kb on + strand at 435.237 kb on + strand at 435.237 kb on + strand at 435.237 kb on + strand at 435.237 kb on + strand at 435.238 kb on - strand at 435.238 kb on - strand at 435.238 kb on - strand at 435.238 kb on - strand at 435.238 kb on - strand at 435.240 kb on + strand at 435.240 kb on + strand at 435.240 kb on + strand at 435.241 kb on - strand at 435.241 kb on - strand at 435.248 kb on + strand at 435.259 kb on + strand at 435.343 kb on + strand at 435.344 kb on - strand at 435.405 kb on + strand at 435.405 kb on + strand at 435.405 kb on + strand at 435.405 kb on + strand at 435.405 kb on + strand at 435.406 kb on - strand at 435.406 kb on - strand at 435.437 kb on + strand at 435.438 kb on - strand at 435.449 kb on + strand at 435.470 kb on - strand at 435.470 kb on - strand at 435.486 kb on + strand at 435.490 kb on + strand at 435.490 kb on + strand at 435.588 kb on + strand at 435.589 kb on - strand at 435.589 kb on - strand at 435.589 kb on - strand at 435.590 kb on + strand at 435.590 kb on + strand at 435.662 kb on + strand at 435.663 kb on - strand at 435.663 kb on - strand at 435.671 kb on + strand at 435.671 kb on + strand at 435.672 kb on - strand at 435.672 kb on - strand at 435.672 kb on - strand at 435.672 kb on - strand at 435.705 kb on + strand, within PP_0357 at 435.706 kb on - strand, within PP_0357 at 435.706 kb on - strand, within PP_0357 at 435.706 kb on - strand, within PP_0357 at 435.735 kb on + strand, within PP_0357 at 435.815 kb on - strand, within PP_0357 at 435.853 kb on + strand, within PP_0357 at 435.853 kb on + strand, within PP_0357 at 435.854 kb on - strand, within PP_0357 at 435.989 kb on + strand, within PP_0357 at 435.989 kb on + strand, within PP_0357
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-1-butanol 0.1 vol% (C) remove 432,105 + PP_0354 0.89 +2.4 432,105 + PP_0354 0.89 +1.9 432,105 + PP_0354 0.89 +2.0 432,106 - PP_0354 0.89 +2.6 432,106 - PP_0354 0.89 +1.0 432,159 + +1.5 432,160 - +1.4 432,160 - +0.3 432,344 - -1.7 432,345 + +1.4 432,345 + +1.5 432,346 - -0.0 432,346 - -1.9 432,346 - -3.0 432,346 - -3.1 432,347 + +0.9 432,347 + +1.2 432,347 + +1.0 432,347 + +1.1 432,348 - -1.4 432,348 - +0.5 432,348 - -1.2 432,351 + +1.1 432,351 + +2.0 432,351 + +1.5 432,351 + +1.9 432,352 - -3.5 432,352 - -3.0 432,354 - -1.4 432,354 - -4.5 432,355 + +0.6 432,356 - -1.8 432,357 + +2.3 432,357 + +1.3 432,357 + +1.1 432,423 + +1.6 432,423 + +2.3 432,423 + -0.2 432,424 - +0.1 432,424 - -1.4 432,424 - -3.6 432,429 + +0.8 432,429 + +0.2 432,430 - -3.2 432,430 - -4.0 432,430 - -2.8 432,491 + PP_0355 0.15 +1.0 432,491 + PP_0355 0.15 +1.3 432,491 + PP_0355 0.15 -0.5 432,492 - PP_0355 0.15 -0.3 432,724 + PP_0355 0.56 +1.6 432,725 - PP_0355 0.56 -0.9 432,733 + PP_0355 0.57 +1.3 432,734 - PP_0355 0.58 -0.1 432,744 + PP_0355 0.59 +1.7 432,745 - PP_0355 0.59 -0.3 432,759 + PP_0355 0.62 +0.8 432,993 - -1.9 432,993 - -0.9 433,023 + -0.5 433,023 + +0.1 433,023 + -0.4 433,023 + -4.5 433,023 + -1.8 433,023 + -2.5 433,024 - -1.9 433,024 - -2.4 433,024 - -2.5 433,024 - -0.3 433,110 - -0.9 433,110 - -3.9 433,171 - -2.8 433,526 + PP_0356 0.23 -4.7 433,527 - PP_0356 0.23 -3.8 433,543 - PP_0356 0.24 -2.8 433,894 + PP_0356 0.40 -4.3 434,025 + PP_0356 0.46 -2.2 434,025 + PP_0356 0.46 -0.4 434,025 + PP_0356 0.46 -4.1 434,025 + PP_0356 0.46 -3.6 434,026 - PP_0356 0.46 -3.5 434,026 - PP_0356 0.46 -4.5 434,026 - PP_0356 0.46 -2.3 434,113 + PP_0356 0.50 -2.4 434,113 + PP_0356 0.50 -3.9 434,114 - PP_0356 0.50 -3.2 434,360 + PP_0356 0.61 -4.1 434,721 + PP_0356 0.78 -4.3 434,721 + PP_0356 0.78 -3.9 434,722 - PP_0356 0.78 -2.6 434,772 + PP_0356 0.80 -4.3 434,784 + PP_0356 0.81 -4.8 435,150 + -0.9 435,151 - -0.4 435,151 - -4.2 435,190 - -3.4 435,190 - -3.7 435,223 - +0.2 435,237 + -2.8 435,237 + -3.8 435,237 + -3.9 435,237 + -2.7 435,237 + -4.7 435,237 + -4.8 435,238 - +0.2 435,238 - +0.2 435,238 - +0.3 435,238 - -0.5 435,238 - -2.4 435,240 + -3.2 435,240 + -2.9 435,240 + -3.7 435,241 - +0.9 435,241 - -0.8 435,248 + -2.9 435,259 + -2.4 435,343 + -2.1 435,344 - +0.3 435,405 + -2.6 435,405 + -4.2 435,405 + -3.0 435,405 + -4.3 435,405 + -0.9 435,406 - -0.6 435,406 - +0.2 435,437 + -4.0 435,438 - -0.1 435,449 + -3.5 435,470 - -0.3 435,470 - +0.6 435,486 + -2.3 435,490 + -0.6 435,490 + +0.0 435,588 + +0.7 435,589 - +0.3 435,589 - -0.2 435,589 - -0.2 435,590 + +3.0 435,590 + -3.6 435,662 + -0.2 435,663 - +2.2 435,663 - +3.2 435,671 + -0.0 435,671 + +1.6 435,672 - +1.6 435,672 - -3.3 435,672 - +0.7 435,672 - -1.1 435,705 + PP_0357 0.11 +1.1 435,706 - PP_0357 0.11 -1.5 435,706 - PP_0357 0.11 +0.1 435,706 - PP_0357 0.11 +1.4 435,735 + PP_0357 0.17 -0.1 435,815 - PP_0357 0.32 +0.0 435,853 + PP_0357 0.39 +0.3 435,853 + PP_0357 0.39 -2.2 435,854 - PP_0357 0.39 -0.2 435,989 + PP_0357 0.66 +0.4 435,989 + PP_0357 0.66 +1.7
Or see this region's nucleotide sequence