Experiment: 3-methyl-1-butanol 0.1 vol% (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0254 and PP_0255 are separated by 56 nucleotides PP_0255 and PP_0256 are separated by 196 nucleotides
PP_0254: PP_0254 - conserved protein of unknown function, at 308,854 to 309,294
_0254
PP_0255: PP_0255 - conserved exported protein of unknown function, at 309,351 to 309,833
_0255
PP_0256: PP_0256 - putative oxidoreductase, at 310,030 to 312,375
_0256
Position (kb) 309
310 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 308.363 kb on + strand at 308.364 kb on - strand at 308.388 kb on + strand at 308.389 kb on - strand at 308.607 kb on + strand at 308.703 kb on + strand at 308.704 kb on - strand at 308.787 kb on + strand at 308.788 kb on - strand at 308.788 kb on - strand at 309.134 kb on + strand, within PP_0254 at 309.134 kb on + strand, within PP_0254 at 309.135 kb on - strand, within PP_0254 at 309.139 kb on + strand, within PP_0254 at 309.292 kb on + strand at 309.353 kb on - strand at 309.388 kb on + strand at 309.388 kb on + strand at 309.389 kb on - strand at 309.389 kb on - strand at 309.487 kb on + strand, within PP_0255 at 309.487 kb on + strand, within PP_0255 at 309.487 kb on + strand, within PP_0255 at 309.487 kb on + strand, within PP_0255 at 309.488 kb on - strand, within PP_0255 at 309.488 kb on - strand, within PP_0255 at 309.488 kb on - strand, within PP_0255 at 309.488 kb on - strand, within PP_0255 at 309.492 kb on - strand, within PP_0255 at 309.535 kb on + strand, within PP_0255 at 309.535 kb on + strand, within PP_0255 at 309.535 kb on + strand, within PP_0255 at 309.535 kb on + strand, within PP_0255 at 309.536 kb on - strand, within PP_0255 at 309.536 kb on - strand, within PP_0255 at 309.536 kb on - strand, within PP_0255 at 309.536 kb on - strand, within PP_0255 at 309.536 kb on - strand, within PP_0255 at 309.536 kb on - strand, within PP_0255 at 309.536 kb on - strand, within PP_0255 at 309.536 kb on - strand, within PP_0255 at 309.536 kb on - strand, within PP_0255 at 309.539 kb on + strand, within PP_0255 at 309.539 kb on + strand, within PP_0255 at 309.575 kb on + strand, within PP_0255 at 309.823 kb on + strand at 309.823 kb on + strand at 309.824 kb on - strand at 309.824 kb on - strand at 309.824 kb on - strand at 309.847 kb on + strand at 309.847 kb on + strand at 309.848 kb on - strand at 309.848 kb on - strand at 309.874 kb on - strand at 309.919 kb on + strand at 309.942 kb on - strand at 309.946 kb on - strand at 309.985 kb on + strand at 310.102 kb on - strand at 310.148 kb on + strand at 310.151 kb on + strand at 310.151 kb on + strand at 310.152 kb on - strand at 310.174 kb on + strand at 310.174 kb on + strand at 310.194 kb on + strand at 310.349 kb on + strand, within PP_0256 at 310.353 kb on + strand, within PP_0256 at 310.353 kb on + strand, within PP_0256 at 310.354 kb on - strand, within PP_0256 at 310.354 kb on - strand, within PP_0256 at 310.364 kb on + strand, within PP_0256 at 310.365 kb on - strand, within PP_0256 at 310.365 kb on - strand, within PP_0256 at 310.423 kb on + strand, within PP_0256 at 310.424 kb on - strand, within PP_0256 at 310.424 kb on - strand, within PP_0256 at 310.523 kb on + strand, within PP_0256 at 310.524 kb on - strand, within PP_0256 at 310.608 kb on - strand, within PP_0256 at 310.633 kb on + strand, within PP_0256 at 310.634 kb on - strand, within PP_0256
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-1-butanol 0.1 vol% (C) remove 308,363 + -1.3 308,364 - -3.3 308,388 + -1.0 308,389 - -2.0 308,607 + -1.7 308,703 + -0.1 308,704 - -0.6 308,787 + -0.4 308,788 - -0.6 308,788 - +1.8 309,134 + PP_0254 0.63 +0.0 309,134 + PP_0254 0.63 +1.4 309,135 - PP_0254 0.64 -0.5 309,139 + PP_0254 0.65 +1.5 309,292 + +0.5 309,353 - +1.2 309,388 + +0.0 309,388 + -1.4 309,389 - -2.6 309,389 - -0.1 309,487 + PP_0255 0.28 -0.8 309,487 + PP_0255 0.28 -0.5 309,487 + PP_0255 0.28 -2.7 309,487 + PP_0255 0.28 -1.0 309,488 - PP_0255 0.28 +0.7 309,488 - PP_0255 0.28 -0.8 309,488 - PP_0255 0.28 +1.7 309,488 - PP_0255 0.28 -1.8 309,492 - PP_0255 0.29 -0.9 309,535 + PP_0255 0.38 +0.2 309,535 + PP_0255 0.38 -0.0 309,535 + PP_0255 0.38 +1.1 309,535 + PP_0255 0.38 +0.0 309,536 - PP_0255 0.38 +1.5 309,536 - PP_0255 0.38 -0.1 309,536 - PP_0255 0.38 -0.0 309,536 - PP_0255 0.38 -0.8 309,536 - PP_0255 0.38 +0.2 309,536 - PP_0255 0.38 -0.3 309,536 - PP_0255 0.38 -0.4 309,536 - PP_0255 0.38 -1.4 309,536 - PP_0255 0.38 -1.0 309,539 + PP_0255 0.39 -0.0 309,539 + PP_0255 0.39 -0.7 309,575 + PP_0255 0.46 -0.6 309,823 + -1.7 309,823 + -1.7 309,824 - +0.3 309,824 - -0.7 309,824 - +0.9 309,847 + +0.5 309,847 + +0.6 309,848 - +0.4 309,848 - +0.5 309,874 - -1.3 309,919 + -0.5 309,942 - -0.2 309,946 - -1.5 309,985 + -0.8 310,102 - +0.4 310,148 + +0.1 310,151 + -0.4 310,151 + -3.1 310,152 - +0.9 310,174 + +0.9 310,174 + +2.2 310,194 + +0.5 310,349 + PP_0256 0.14 -1.0 310,353 + PP_0256 0.14 -0.7 310,353 + PP_0256 0.14 -1.4 310,354 - PP_0256 0.14 +0.7 310,354 - PP_0256 0.14 -0.4 310,364 + PP_0256 0.14 -0.7 310,365 - PP_0256 0.14 +1.4 310,365 - PP_0256 0.14 +0.2 310,423 + PP_0256 0.17 +0.6 310,424 - PP_0256 0.17 -0.2 310,424 - PP_0256 0.17 -0.4 310,523 + PP_0256 0.21 -0.8 310,524 - PP_0256 0.21 +0.8 310,608 - PP_0256 0.25 +0.3 310,633 + PP_0256 0.26 -1.1 310,634 - PP_0256 0.26 +0.4
Or see this region's nucleotide sequence