Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_4086

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
4,871,204	+				+0.5
4,871,291	-				+0.3
4,871,301	-				+0.9
4,871,301	-				-0.0
4,871,316	+				-1.3
4,871,317	-				+1.1
4,871,317	-				+2.4
4,871,332	+				+0.1
4,871,332	+				-0.4
4,871,333	-				-0.5
4,871,333	-				+0.1
4,871,336	+				-0.0
4,871,336	+				-0.0
4,871,336	+				-0.3
4,871,336	+				-0.5
4,871,336	+				+3.1
4,871,336	+				+1.0
4,871,336	+				-3.5
4,871,336	+				+1.4
4,871,336	+				-0.2
4,871,336	+				-0.2
4,871,337	-				-0.2
4,871,337	-				-0.9
4,871,337	-				-0.6
4,871,337	-				+1.6
4,871,337	-				-0.8
4,871,337	-				+1.1
4,871,337	-				-0.9
4,871,337	-				+0.6
4,871,337	-				+0.9
4,871,351	-				-0.1
4,871,367	+				-0.4
4,871,368	-				+0.4
4,871,404	+		Psyr_4085	0.14	-1.4
4,871,448	-		Psyr_4085	0.22	+2.1
4,871,448	-		Psyr_4085	0.22	+0.5
4,871,519	-		Psyr_4085	0.36	+1.1
4,871,574	+		Psyr_4085	0.47	-1.7
4,871,599	-		Psyr_4085	0.52	-2.5
4,871,632	+		Psyr_4085	0.58	-0.1
4,871,640	+		Psyr_4085	0.59	-1.5
4,871,705	+		Psyr_4085	0.72	-0.5
4,871,736	+		Psyr_4085	0.78	+2.0
4,871,737	-		Psyr_4085	0.78	+0.9
4,871,737	-		Psyr_4085	0.78	+0.1
4,871,758	-		Psyr_4085	0.82	-0.6
4,871,831	+				+0.4
4,871,832	-				-0.6
4,871,837	+				+0.4
4,871,837	+				+0.7
4,871,837	+				+0.5
4,871,838	-				+0.0
4,871,838	-				-1.3
4,871,838	-				-2.0
4,871,838	-				-1.2
4,871,842	+				-0.3
4,871,843	-				-1.3
4,871,846	+				+0.2
4,871,847	-				-1.4
4,871,847	-				+1.1
4,871,847	-				-1.5
4,871,885	+				-0.7
4,871,886	-				-0.1
4,871,946	+				-1.2
4,871,946	+				+1.9
4,871,966	-				-0.3
4,871,966	-				-0.7
4,871,966	-				-0.4
4,871,969	+				-0.2
4,872,009	+				+0.0
4,872,009	+				+0.3
4,872,025	-				+0.4
4,872,025	-				-0.5
4,872,166	+		Psyr_4086	0.17	-2.0
4,872,166	+		Psyr_4086	0.17	-0.7
4,872,166	+		Psyr_4086	0.17	+1.5
4,872,167	-		Psyr_4086	0.17	+0.7
4,872,167	-		Psyr_4086	0.17	-0.6
4,872,167	-		Psyr_4086	0.17	-0.8
4,872,167	-		Psyr_4086	0.17	+0.2
4,872,743	+		Psyr_4086	0.87	-0.1
4,872,743	+		Psyr_4086	0.87	+1.4
4,872,744	-		Psyr_4086	0.87	+2.1
4,873,018	+				+1.7
4,873,437	+				+1.3
4,873,437	+				-0.3
4,873,437	+				-0.9
4,873,437	+				+0.1
4,873,437	+				-2.5
4,873,437	+				-2.8
4,873,438	-				-0.6
4,873,456	+				+1.0
4,873,456	+				+2.5
4,873,456	+				-0.6
4,873,456	+				+0.3
4,873,456	+				+0.4
4,873,456	+				-1.7
4,873,456	+				-2.1
4,873,456	+				+0.6
4,873,456	+				+0.2
4,873,456	+				+0.5
4,873,456	+				+0.4
4,873,456	+				+0.1
4,873,456	+				+0.9
4,873,456	+				-0.3
4,873,456	+				+0.4
4,873,456	+				+2.1
4,873,456	+				-0.5
4,873,456	+				+1.0
4,873,456	+				+1.0
4,873,456	+				-0.1
4,873,456	+				+1.5
4,873,456	+				-0.2
4,873,456	+				-0.3
4,873,456	+				-0.9
4,873,456	+				-0.6
4,873,456	+				+0.0
4,873,457	-				+2.0
4,873,457	-				-0.5
4,873,457	-				-0.9
4,873,457	-				+4.7
4,873,457	-				-0.5
4,873,457	-				-2.3
4,873,457	-				+0.1
4,873,457	-				+0.2
4,873,457	-				-1.2
4,873,457	-				-1.0
4,873,457	-				-0.7
4,873,457	-				-0.7
4,873,457	-				+0.3
4,873,457	-				-0.2
4,873,457	-				+3.5
4,873,457	-				-0.5
4,873,457	-				+0.4
4,873,457	-				-0.2
4,873,457	-				+0.1
4,873,457	-				-1.0
4,873,457	-				+1.0
4,873,457	-				-1.1
4,873,457	-				-1.7
4,873,457	-				-1.8
4,873,457	-				+1.1
4,873,457	-				-0.5
4,873,457	-				-0.9
4,873,470	-				-2.3
4,873,527	+				+0.1
4,873,527	+				+0.4
4,873,528	-				+2.1
4,873,528	-				-1.5
4,873,528	-				+0.8
4,873,528	-				-0.3
4,873,530	-				-0.9
4,873,610	-				-0.5
4,873,610	-				-0.5
4,873,610	-				-0.2