Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3336

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
3,990,398	+		Psyr_3335	0.38	+0.1
3,990,399	-		Psyr_3335	0.38	-0.0
3,990,545	+		Psyr_3335	0.53	-0.3
3,990,545	+		Psyr_3335	0.53	+0.4
3,990,546	-		Psyr_3335	0.53	-0.6
3,990,546	-		Psyr_3335	0.53	-0.5
3,990,606	+		Psyr_3335	0.59	+1.5
3,990,658	+		Psyr_3335	0.65	+0.0
3,990,659	-		Psyr_3335	0.65	+1.8
3,990,695	+		Psyr_3335	0.69	+1.2
3,990,695	+		Psyr_3335	0.69	-0.7
3,990,696	-		Psyr_3335	0.69	+1.6
3,990,719	+		Psyr_3335	0.71	-0.7
3,990,842	+		Psyr_3335	0.84	+0.5
3,990,842	+		Psyr_3335	0.84	-0.5
3,990,842	+		Psyr_3335	0.84	-1.4
3,990,842	+		Psyr_3335	0.84	+0.1
3,990,842	+		Psyr_3335	0.84	+0.9
3,990,842	+		Psyr_3335	0.84	+0.0
3,990,842	+		Psyr_3335	0.84	+0.1
3,990,842	+		Psyr_3335	0.84	-1.7
3,990,843	-		Psyr_3335	0.84	+0.6
3,990,843	-		Psyr_3335	0.84	+0.1
3,990,843	-		Psyr_3335	0.84	+1.0
3,991,016	+				+0.5
3,991,017	-				-1.8
3,991,025	+				+0.3
3,991,025	+				+1.7
3,991,026	-				+1.2
3,991,046	+				+0.2
3,991,046	+				+0.3
3,991,051	-				+0.4
3,991,051	-				+1.6
3,991,051	-				+0.2
3,991,058	+				+0.6
3,991,058	+				+0.3
3,991,058	+				+3.5
3,991,058	+				+0.3
3,991,058	+				-1.0
3,991,058	+				-0.4
3,991,058	+				+1.6
3,991,058	+				+2.0
3,991,058	+				+0.8
3,991,058	+				-0.4
3,991,058	+				+0.9
3,991,058	+				-3.2
3,991,059	-				+0.4
3,991,059	-				-0.9
3,991,059	-				-0.4
3,991,059	-				-1.8
3,991,059	-				+1.2
3,991,059	-				+0.2
3,991,060	+				+0.7
3,991,060	+				-0.2
3,991,060	+				-0.8
3,991,060	+				-0.8
3,991,061	-				+0.4
3,991,061	-				-0.7
3,991,061	-				-1.8
3,991,061	-				-0.3
3,991,061	-				-1.8
3,991,094	+				-0.3
3,991,094	+				+1.0
3,991,094	+				-0.7
3,991,094	+				+1.7
3,991,094	+				-0.4
3,991,094	+				+0.3
3,991,095	-				+2.5
3,991,095	-				+1.2
3,991,095	-				-1.4
3,991,095	-				+1.2
3,991,095	-				+2.2
3,991,118	-				-0.7
3,991,118	-				+0.4
3,991,130	+				-0.4
3,991,131	-				-0.3
3,991,163	+				+3.5
3,991,164	-				-1.2
3,991,164	-				-0.7
3,991,410	-				-1.0
3,991,582	+		Psyr_3336	0.25	-0.5
3,991,773	+		Psyr_3336	0.44	+2.9
3,991,774	-		Psyr_3336	0.44	-0.8
3,991,774	-		Psyr_3336	0.44	-0.6
3,991,774	-		Psyr_3336	0.44	-0.1
3,991,855	-		Psyr_3336	0.52	+0.3
3,991,898	+		Psyr_3336	0.56	+2.0
3,991,900	+		Psyr_3336	0.56	+0.4
3,992,025	+		Psyr_3336	0.69	+0.3
3,992,025	+		Psyr_3336	0.69	-0.3
3,992,025	+		Psyr_3336	0.69	-0.7
3,992,025	+		Psyr_3336	0.69	+0.5
3,992,026	-		Psyr_3336	0.69	+1.4
3,992,026	-		Psyr_3336	0.69	+2.7
3,992,026	-		Psyr_3336	0.69	+1.2
3,992,178	-		Psyr_3336	0.84	+0.4
3,992,178	-		Psyr_3336	0.84	+1.6
3,992,181	+		Psyr_3336	0.84	-0.8
3,992,339	+				-0.4
3,992,339	+				+0.8
3,992,356	+				-0.3
3,992,356	+				+2.7
3,992,357	-				+0.1
3,992,361	+				-1.0
3,992,362	-				+0.2
3,992,362	-				+0.2
3,992,487	+				+0.1
3,992,488	-				+0.8
3,992,515	-				+1.2
3,992,585	+				+0.8
3,992,604	-				+1.8
3,992,609	+				-0.2
3,992,609	+				+0.3
3,992,868	+		Psyr_3337	0.53	+1.7
3,992,868	+		Psyr_3337	0.53	+1.1
3,992,868	+		Psyr_3337	0.53	+0.7
3,992,868	+		Psyr_3337	0.53	-0.3
3,992,869	-		Psyr_3337	0.53	-0.8
3,993,179	-				-0.4
3,993,188	-				+2.2
3,993,308	+				+0.3
3,993,308	+				-0.4
3,993,309	-				+1.0
3,993,309	-				-1.1
3,993,313	-				-0.6
3,993,313	-				+2.7
3,993,321	+				-0.3
3,993,332	+				-0.9