Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2593

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
3,039,030	+		Psyr_2592	0.34	-1.9
3,039,030	+		Psyr_2592	0.34	+0.2
3,039,030	+		Psyr_2592	0.34	+0.8
3,039,031	-		Psyr_2592	0.34	-1.3
3,039,117	+		Psyr_2592	0.43	-1.5
3,039,117	+		Psyr_2592	0.43	-1.6
3,039,250	-		Psyr_2592	0.56	-1.4
3,039,685	+				-0.2
3,039,685	+				+1.2
3,039,685	+				-0.1
3,039,685	+				-0.8
3,039,686	-				-2.7
3,039,686	-				-2.9
3,039,713	+				+0.5
3,039,714	-				+0.8
3,039,754	+				-1.1
3,039,795	-				-0.4
3,040,199	+		Psyr_2593	0.61	-1.4
3,040,199	+		Psyr_2593	0.61	-1.4
3,040,199	+		Psyr_2593	0.61	-2.3
3,040,199	+		Psyr_2593	0.61	-2.9
3,040,199	+		Psyr_2593	0.61	-2.1
3,040,199	+		Psyr_2593	0.61	-0.3
3,040,199	+		Psyr_2593	0.61	-0.6
3,040,200	-		Psyr_2593	0.61	-1.8
3,040,334	-		Psyr_2593	0.78	-0.8
3,041,010	+		Psyr_2594	0.65	-1.3
3,041,127	+		Psyr_2594	0.80	-2.7
3,041,127	+		Psyr_2594	0.80	-1.9
3,041,127	+		Psyr_2594	0.80	-3.1
3,041,128	-		Psyr_2594	0.80	+1.4
3,041,214	+				+1.4
3,041,214	+				-3.3
3,041,215	-				+1.2
3,041,242	-				-0.8