Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2561

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
2,974,145	-				-0.0
2,974,270	+		Psyr_2560	0.21	+0.8
2,974,330	+		Psyr_2560	0.27	-0.1
2,974,331	-		Psyr_2560	0.27	+2.4
2,974,591	+		Psyr_2560	0.52	-0.3
2,974,592	-		Psyr_2560	0.52	-1.4
2,974,597	+		Psyr_2560	0.53	-0.0
2,974,597	+		Psyr_2560	0.53	-0.8
2,974,597	+		Psyr_2560	0.53	+0.8
2,974,598	-		Psyr_2560	0.53	-0.0
2,974,692	-		Psyr_2560	0.62	+1.6
2,974,692	-		Psyr_2560	0.62	-2.7
2,974,696	-		Psyr_2560	0.62	+2.1
2,975,104	-				+0.9
2,975,188	+		Psyr_2561	0.14	-1.0
2,975,188	+		Psyr_2561	0.14	+1.0
2,975,188	+		Psyr_2561	0.14	-0.0
2,975,242	+		Psyr_2561	0.23	-1.1
2,975,242	+		Psyr_2561	0.23	-1.0
2,975,263	+		Psyr_2561	0.27	+1.0
2,975,590	+		Psyr_2561	0.83	+0.9
2,975,591	-		Psyr_2561	0.83	+2.0
2,975,591	-		Psyr_2561	0.83	+0.3
2,975,591	-		Psyr_2561	0.83	+0.1
2,975,595	-		Psyr_2561	0.84	-2.1
2,975,595	-		Psyr_2561	0.84	+1.8
2,976,396	+		Psyr_2562	0.45	-0.2