Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1967

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
2,278,357	+		Psyr_1966	0.58	-1.8
2,278,357	+		Psyr_1966	0.58	+0.0
2,278,357	+		Psyr_1966	0.58	-1.1
2,278,358	-		Psyr_1966	0.58	+0.7
2,278,358	-		Psyr_1966	0.58	+2.2
2,278,988	+				-2.1
2,278,989	-				-0.5
2,279,073	+				-0.3
2,279,081	-				+0.4
2,279,189	+				-0.4
2,279,190	-				-0.2
2,279,192	+				+0.6
2,279,192	+				+1.0
2,279,499	-		Psyr_1967	0.23	+0.8
2,279,936	+		Psyr_1967	0.50	-1.1
2,279,937	-		Psyr_1967	0.50	+2.5
2,279,937	-		Psyr_1967	0.50	-0.5
2,279,938	+		Psyr_1967	0.50	+0.7
2,279,938	+		Psyr_1967	0.50	-1.9
2,279,938	+		Psyr_1967	0.50	+2.0
2,279,939	-		Psyr_1967	0.50	-2.0
2,279,939	-		Psyr_1967	0.50	+0.6
2,279,939	-		Psyr_1967	0.50	-0.9
2,279,939	-		Psyr_1967	0.50	-0.3
2,280,050	+		Psyr_1967	0.57	-1.7
2,280,113	+		Psyr_1967	0.61	-0.4
2,280,113	+		Psyr_1967	0.61	+1.0
2,280,113	+		Psyr_1967	0.61	-0.8
2,280,158	-		Psyr_1967	0.63	+1.0
2,280,448	-		Psyr_1967	0.81	+0.5
2,280,722	+				+1.1
2,280,723	-				-2.0
2,280,920	+				-0.2
2,281,140	-				+1.9
2,281,394	+		Psyr_1968	0.21	-0.1