Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1065

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
1,206,857	+				-0.6
1,206,857	+				-1.3
1,206,858	-				+1.0
1,206,931	+				-0.6
1,206,932	-				-0.7
1,206,932	-				+0.3
1,206,932	-				+0.7
1,206,946	+		Psyr_1064	0.12	-0.1
1,206,947	-		Psyr_1064	0.12	-0.0
1,206,947	-		Psyr_1064	0.12	-0.1
1,206,976	+		Psyr_1064	0.15	+3.2
1,206,976	+		Psyr_1064	0.15	+1.2
1,206,976	+		Psyr_1064	0.15	+0.9
1,206,976	+		Psyr_1064	0.15	+0.5
1,206,977	-		Psyr_1064	0.16	-1.2
1,206,977	-		Psyr_1064	0.16	-0.3
1,206,977	-		Psyr_1064	0.16	-0.6
1,207,017	-		Psyr_1064	0.21	+0.7
1,207,017	-		Psyr_1064	0.21	-0.1
1,207,034	+		Psyr_1064	0.23	-0.1
1,207,035	-		Psyr_1064	0.23	-0.5
1,207,113	-		Psyr_1064	0.33	+2.2
1,207,113	-		Psyr_1064	0.33	+0.1
1,207,113	-		Psyr_1064	0.33	-0.4
1,207,373	+		Psyr_1064	0.66	+0.4
1,207,373	+		Psyr_1064	0.66	+0.5
1,207,373	+		Psyr_1064	0.66	+0.2
1,207,373	+		Psyr_1064	0.66	-0.4
1,207,694	+				-0.0
1,207,694	+				+0.0
1,207,694	+				-1.3
1,207,695	-				-0.6
1,207,695	-				+0.2
1,207,695	-				+0.6
1,207,695	-				+1.0
1,207,695	-				-0.0
1,207,749	+				+0.6
1,207,749	+				+0.4
1,207,749	+				-0.4
1,207,750	-				+0.3
1,207,763	+				-1.2
1,207,763	+				+0.2
1,207,763	+				+0.7
1,207,763	+				-3.6
1,207,763	+				-0.8
1,207,764	-				+0.8
1,207,764	-				+0.2
1,207,764	-				+0.1
1,207,779	+				+0.6
1,207,779	+				+0.6
1,207,779	+				+0.7
1,207,779	+				-0.0
1,207,779	+				-0.1
1,207,779	+				+2.2
1,207,780	-				+0.1
1,207,780	-				-1.0
1,207,780	-				+1.7
1,207,780	-				-0.2
1,207,780	-				+0.5
1,207,780	-				+1.6
1,207,786	+				-0.3
1,207,786	+				+3.8
1,207,786	+				+1.2
1,207,786	+				-0.5
1,207,787	-				+0.3
1,207,787	-				-1.4
1,207,787	-				-2.3
1,207,787	-				-0.6
1,207,787	-				+0.1
1,207,787	-				-0.3
1,207,787	-				-0.9
1,207,852	-				+0.3
1,208,006	+		Psyr_1065	0.14	-0.8
1,208,006	+		Psyr_1065	0.14	-1.0
1,208,006	+		Psyr_1065	0.14	+0.2
1,208,007	-		Psyr_1065	0.14	-2.6
1,208,123	+		Psyr_1065	0.24	-0.4
1,208,123	+		Psyr_1065	0.24	+0.9
1,208,124	-		Psyr_1065	0.24	+0.1
1,208,124	-		Psyr_1065	0.24	+2.4
1,208,124	-		Psyr_1065	0.24	-0.7
1,208,213	+		Psyr_1065	0.32	-0.4
1,208,214	-		Psyr_1065	0.32	-0.1
1,208,237	+		Psyr_1065	0.34	-0.5
1,208,237	+		Psyr_1065	0.34	-0.5
1,208,237	+		Psyr_1065	0.34	+0.2
1,208,237	+		Psyr_1065	0.34	-0.3
1,208,237	+		Psyr_1065	0.34	-0.2
1,208,238	-		Psyr_1065	0.34	+0.6
1,208,238	-		Psyr_1065	0.34	+0.1
1,208,342	+		Psyr_1065	0.43	-1.1
1,208,343	-		Psyr_1065	0.43	-1.0
1,208,694	-		Psyr_1065	0.73	+1.1
1,208,950	+				-1.6
1,208,950	+				-3.1
1,208,950	+				-0.3
1,209,049	+				+1.4
1,209,079	-				-0.3
1,209,147	+				+0.8
1,209,147	+				-0.2
1,209,147	+				+0.1
1,209,147	+				+1.5
1,209,148	-				-0.4
1,209,148	-				+3.5
1,209,148	-				+0.7
1,209,148	-				-0.6
1,209,148	-				+1.2
1,209,150	+				+1.8
1,209,150	+				-0.4
1,209,294	+				-0.0
1,209,294	+				+0.9
1,209,294	+				-1.1
1,209,295	-				+4.0
1,209,295	-				-0.6
1,209,356	+				-0.5
1,209,357	-				-0.3
1,209,357	-				+0.7
1,209,376	-				-0.1
1,209,581	-		Psyr_1066	0.19	-0.2
1,209,600	-		Psyr_1066	0.21	+1.1
1,209,789	-		Psyr_1066	0.34	+0.7
1,209,950	-		Psyr_1066	0.46	-0.7
1,209,985	-		Psyr_1066	0.48	-0.9