Strain Fitness in Pseudomonas putida KT2440 around PP_4066

Experiment: 3-methyl-3-buten-1-ol 0.25 vol% (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-3-buten-1-ol 0.25 vol% (C)
4,590,061	-		PP_4065	0.46	-4.3
4,590,061	-		PP_4065	0.46	-3.2
4,590,169	-		PP_4065	0.53	-2.8
4,590,187	-		PP_4065	0.54	-3.7
4,590,471	+		PP_4065	0.72	-4.3
4,590,582	+		PP_4065	0.79	-4.9
4,590,583	-		PP_4065	0.79	-3.9
4,590,584	-		PP_4065	0.79	-4.6
4,590,792	+				-3.7
4,590,793	-				-3.4
4,590,796	-				-3.8
4,590,796	-				-4.6
4,591,213	-		PP_4066	0.35	-3.7
4,591,345	+		PP_4066	0.51	+0.3
4,591,345	+		PP_4066	0.51	-0.2
4,591,346	-		PP_4066	0.51	-0.7
4,591,420	-		PP_4066	0.60	-1.2
4,591,485	+		PP_4066	0.68	+1.3
4,591,486	-		PP_4066	0.68	-2.5
4,591,526	-		PP_4066	0.73	-3.9
4,591,931	+				-5.4
4,592,357	+		PP_4067	0.31	-2.2
4,592,421	-		PP_4067	0.35	-4.3
4,592,555	+		PP_4067	0.42	-3.8
4,592,736	+		PP_4067	0.51	-3.8