Strain Fitness in Pseudomonas putida KT2440 around PP_3755

Experiment: 3-methyl-3-buten-1-ol 0.25 vol% (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-3-buten-1-ol 0.25 vol% (C)
4,283,689	-		PP_3754	0.25	-0.3
4,283,689	-		PP_3754	0.25	+0.3
4,283,774	-		PP_3754	0.32	-0.4
4,283,774	-		PP_3754	0.32	+0.6
4,283,831	-		PP_3754	0.37	+0.8
4,283,832	+		PP_3754	0.37	+0.3
4,283,832	+		PP_3754	0.37	-0.1
4,283,833	-		PP_3754	0.37	-0.3
4,284,236	-				+2.1
4,284,537	+				-0.3
4,284,824	+		PP_3755	0.27	-0.3
4,284,825	-		PP_3755	0.27	-0.4
4,284,946	+		PP_3755	0.41	-0.1
4,284,946	+		PP_3755	0.41	-0.2
4,284,946	+		PP_3755	0.41	-0.3
4,284,946	+		PP_3755	0.41	-1.4
4,284,947	-		PP_3755	0.41	+0.4
4,284,947	-		PP_3755	0.41	-0.6
4,284,947	-		PP_3755	0.41	-0.4
4,285,086	-		PP_3755	0.58	-0.0
4,285,362	-				-1.7
4,285,440	-				+2.6
4,285,440	-				+0.2
4,285,601	+		PP_3756	0.25	+0.1
4,285,601	+		PP_3756	0.25	-0.3
4,285,634	+		PP_3756	0.30	+0.3
4,285,655	+		PP_3756	0.34	-0.4
4,285,655	+		PP_3756	0.34	-0.6
4,285,655	+		PP_3756	0.34	+0.2
4,285,847	+		PP_3756	0.67	+0.7
4,285,847	+		PP_3756	0.67	+0.4
4,285,847	+		PP_3756	0.67	-0.1
4,285,924	-		PP_3756	0.80	+0.2
4,286,123	-				+0.1
4,286,258	-		PP_3757	0.45	-1.8
4,286,373	+		PP_3757	0.76	+0.8
4,286,374	-				+1.3
4,286,391	+		PP_3757	0.80	+0.1
4,286,391	+		PP_3757	0.80	-0.0