Strain Fitness in Pseudomonas putida KT2440 around PP_1023

Experiment: 3-methyl-3-buten-1-ol 0.25 vol% (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-3-buten-1-ol 0.25 vol% (C)
1,166,141	+		PP_1022	0.36	+0.1
1,166,242	+		PP_1022	0.43	-0.5
1,166,471	+		PP_1022	0.58	+1.1
1,166,471	+		PP_1022	0.58	-1.2
1,166,582	-		PP_1022	0.66	+0.1
1,166,681	+		PP_1022	0.72	-0.9
1,166,681	+		PP_1022	0.72	+0.6
1,166,681	+		PP_1022	0.72	+0.0
1,166,681	+		PP_1022	0.72	+0.1
1,166,681	+		PP_1022	0.72	+0.9
1,166,716	+		PP_1022	0.75	+0.8
1,166,870	+		PP_1022	0.85	+0.1
1,166,870	+		PP_1022	0.85	-2.3
1,166,871	-		PP_1022	0.85	-0.1
1,166,981	-				+1.5
1,166,981	-				+0.5
1,166,981	-				+1.5
1,167,079	+				-1.4
1,168,501	-				+0.5
1,168,547	+				-0.9
1,168,547	+				-0.4
1,168,548	-				-0.6
1,168,581	-				-0.3
1,168,592	+				+1.5
1,168,641	-				+0.1
1,168,643	+				-1.8
1,168,643	+				-0.2
1,168,644	-				+1.2
1,168,644	-				+0.2
1,168,644	-				-0.7