Experiment: 3-methyl-3-buten-1-ol 0.1 vol% (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0633 and PP_0634 are separated by 216 nucleotides PP_0634 and PP_t12 are separated by 71 nucleotides PP_t12 and PP_0635 are separated by 499 nucleotides
PP_0633: PP_0633 - Type 4 fimbrial assembly protein PilC, at 739,418 to 740,626
_0633
PP_0634: PP_0634 - Fimbrial protein, at 740,843 to 741,253
_0634
PP_t12: PP_t12 - tRNA-Thr, at 741,325 to 741,400
_t12
PP_0635: PP_0635 - Group II intron-encoding maturase, at 741,900 to 743,321
_0635
Position (kb) 741
742 Strain fitness (log2 ratio) -2
-1
0
1 at 740.536 kb on - strand at 740.536 kb on - strand at 740.604 kb on + strand at 740.604 kb on + strand at 740.604 kb on + strand at 740.710 kb on + strand at 740.711 kb on - strand at 740.715 kb on + strand at 740.715 kb on + strand at 740.716 kb on - strand at 740.716 kb on - strand at 740.716 kb on - strand at 740.836 kb on + strand at 740.836 kb on + strand at 740.836 kb on + strand at 740.836 kb on + strand at 740.836 kb on + strand at 740.836 kb on + strand at 740.837 kb on - strand at 740.837 kb on - strand at 740.837 kb on - strand at 740.861 kb on - strand at 740.930 kb on + strand, within PP_0634 at 740.930 kb on + strand, within PP_0634 at 740.930 kb on + strand, within PP_0634 at 740.931 kb on - strand, within PP_0634 at 741.030 kb on + strand, within PP_0634 at 741.030 kb on + strand, within PP_0634 at 741.030 kb on + strand, within PP_0634 at 741.031 kb on - strand, within PP_0634 at 741.031 kb on - strand, within PP_0634 at 741.040 kb on - strand, within PP_0634 at 741.040 kb on - strand, within PP_0634 at 741.266 kb on - strand at 741.266 kb on - strand at 741.266 kb on - strand at 741.310 kb on + strand at 741.311 kb on - strand at 741.311 kb on - strand at 741.311 kb on - strand at 741.332 kb on + strand at 741.360 kb on + strand, within PP_t12 at 741.415 kb on - strand at 741.443 kb on + strand at 741.443 kb on + strand at 741.443 kb on + strand at 741.443 kb on + strand at 741.443 kb on + strand at 741.444 kb on - strand at 741.444 kb on - strand at 741.444 kb on - strand at 741.444 kb on - strand at 741.500 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-3-buten-1-ol 0.1 vol% (C) remove 740,536 - +1.5 740,536 - +0.9 740,604 + +0.7 740,604 + +0.0 740,604 + +0.5 740,710 + -0.4 740,711 - +0.7 740,715 + +0.1 740,715 + -0.7 740,716 - +0.9 740,716 - +0.4 740,716 - -0.2 740,836 + -0.3 740,836 + +0.5 740,836 + -0.5 740,836 + +0.1 740,836 + +0.0 740,836 + -0.3 740,837 - -0.4 740,837 - +0.0 740,837 - -0.2 740,861 - -0.9 740,930 + PP_0634 0.21 -2.1 740,930 + PP_0634 0.21 -0.7 740,930 + PP_0634 0.21 -0.8 740,931 - PP_0634 0.21 -0.8 741,030 + PP_0634 0.45 +0.2 741,030 + PP_0634 0.45 -0.5 741,030 + PP_0634 0.45 +0.6 741,031 - PP_0634 0.46 -0.4 741,031 - PP_0634 0.46 -0.7 741,040 - PP_0634 0.48 -1.7 741,040 - PP_0634 0.48 +0.3 741,266 - +1.0 741,266 - +0.5 741,266 - -0.9 741,310 + +0.0 741,311 - -0.3 741,311 - -0.9 741,311 - +0.4 741,332 + -0.5 741,360 + PP_t12 0.46 -1.5 741,415 - -0.4 741,443 + -0.3 741,443 + +0.1 741,443 + +1.3 741,443 + -0.0 741,443 + -0.7 741,444 - +0.2 741,444 - -0.4 741,444 - -0.7 741,444 - +0.6 741,500 - -0.5
Or see this region's nucleotide sequence