Experiment: 3-methyl-3-buten-1-ol 0.1 vol% (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_3698 and PP_3699 are separated by 138 nucleotides PP_3699 and PP_3700 are separated by 261 nucleotides
PP_3698: PP_3698 - conserved protein of unknown function, at 4,217,797 to 4,219,296
_3698
PP_3699: PP_3699 - conserved protein of unknown function, at 4,219,435 to 4,221,141
_3699
PP_3700: PP_3700 - putative ATPases involved in chromosome partitioning, at 4,221,403 to 4,222,509
_3700
Position (kb) 4219
4220
4221
4222 Strain fitness (log2 ratio) -1
0
1
2 at 4218.449 kb on + strand, within PP_3698 at 4218.449 kb on + strand, within PP_3698 at 4218.450 kb on - strand, within PP_3698 at 4218.512 kb on - strand, within PP_3698 at 4218.523 kb on + strand, within PP_3698 at 4218.523 kb on + strand at 4218.523 kb on + strand, within PP_3698 at 4218.524 kb on - strand, within PP_3698 at 4218.645 kb on + strand, within PP_3698 at 4218.675 kb on + strand, within PP_3698 at 4218.731 kb on + strand, within PP_3698 at 4218.731 kb on + strand, within PP_3698 at 4218.732 kb on - strand, within PP_3698 at 4218.732 kb on - strand, within PP_3698 at 4218.732 kb on - strand, within PP_3698 at 4218.778 kb on + strand, within PP_3698 at 4218.779 kb on - strand, within PP_3698 at 4218.779 kb on - strand, within PP_3698 at 4218.779 kb on - strand, within PP_3698 at 4218.779 kb on - strand, within PP_3698 at 4218.993 kb on - strand, within PP_3698 at 4218.993 kb on - strand, within PP_3698 at 4219.042 kb on + strand, within PP_3698 at 4219.042 kb on + strand, within PP_3698 at 4219.042 kb on + strand, within PP_3698 at 4219.042 kb on + strand, within PP_3698 at 4219.063 kb on + strand, within PP_3698 at 4219.064 kb on - strand, within PP_3698 at 4219.136 kb on - strand, within PP_3698 at 4219.136 kb on - strand, within PP_3698 at 4219.211 kb on + strand at 4219.211 kb on + strand at 4219.212 kb on - strand at 4219.212 kb on - strand at 4219.212 kb on - strand at 4219.212 kb on - strand at 4219.228 kb on + strand at 4219.257 kb on + strand at 4219.257 kb on + strand at 4219.257 kb on + strand at 4219.257 kb on + strand at 4219.258 kb on - strand at 4219.258 kb on - strand at 4219.258 kb on - strand at 4219.258 kb on - strand at 4219.262 kb on + strand at 4219.262 kb on + strand at 4219.263 kb on - strand at 4219.263 kb on - strand at 4219.263 kb on - strand at 4219.263 kb on - strand at 4219.280 kb on - strand at 4219.304 kb on + strand at 4219.305 kb on - strand at 4219.311 kb on + strand at 4219.350 kb on + strand at 4219.351 kb on - strand at 4219.351 kb on - strand at 4219.385 kb on + strand at 4219.420 kb on + strand at 4219.421 kb on - strand at 4219.421 kb on - strand at 4219.424 kb on + strand at 4219.424 kb on + strand at 4219.424 kb on + strand at 4219.424 kb on + strand at 4219.425 kb on - strand at 4219.425 kb on - strand at 4219.425 kb on - strand at 4219.440 kb on + strand at 4219.440 kb on + strand at 4219.441 kb on - strand at 4219.441 kb on - strand at 4219.441 kb on - strand at 4219.506 kb on + strand at 4219.506 kb on + strand at 4219.506 kb on + strand at 4219.506 kb on + strand at 4219.507 kb on - strand at 4219.507 kb on - strand at 4219.507 kb on - strand at 4219.507 kb on - strand at 4219.558 kb on - strand at 4219.558 kb on - strand at 4219.622 kb on - strand, within PP_3699 at 4219.645 kb on - strand, within PP_3699 at 4219.689 kb on - strand, within PP_3699 at 4219.808 kb on - strand, within PP_3699 at 4219.853 kb on - strand, within PP_3699 at 4219.878 kb on + strand, within PP_3699 at 4219.879 kb on - strand, within PP_3699 at 4219.896 kb on - strand, within PP_3699 at 4219.905 kb on + strand, within PP_3699 at 4219.961 kb on + strand, within PP_3699 at 4219.962 kb on - strand, within PP_3699 at 4219.962 kb on - strand, within PP_3699 at 4219.962 kb on - strand, within PP_3699 at 4220.254 kb on + strand, within PP_3699 at 4220.254 kb on + strand, within PP_3699 at 4220.254 kb on + strand, within PP_3699 at 4220.266 kb on - strand, within PP_3699 at 4220.269 kb on + strand, within PP_3699 at 4220.315 kb on - strand, within PP_3699 at 4220.336 kb on - strand, within PP_3699 at 4220.359 kb on - strand, within PP_3699 at 4220.399 kb on + strand, within PP_3699 at 4220.399 kb on + strand, within PP_3699 at 4220.400 kb on - strand, within PP_3699 at 4220.471 kb on + strand, within PP_3699 at 4220.471 kb on + strand, within PP_3699 at 4220.472 kb on - strand at 4220.515 kb on + strand, within PP_3699 at 4220.515 kb on + strand, within PP_3699 at 4220.516 kb on - strand, within PP_3699 at 4220.516 kb on - strand, within PP_3699 at 4220.516 kb on - strand, within PP_3699 at 4220.531 kb on + strand, within PP_3699 at 4220.531 kb on + strand, within PP_3699 at 4220.532 kb on - strand, within PP_3699 at 4220.532 kb on - strand, within PP_3699 at 4220.532 kb on - strand, within PP_3699 at 4220.554 kb on + strand, within PP_3699 at 4220.554 kb on + strand, within PP_3699 at 4220.555 kb on - strand, within PP_3699 at 4220.576 kb on + strand, within PP_3699 at 4220.577 kb on - strand, within PP_3699 at 4220.626 kb on + strand, within PP_3699 at 4220.626 kb on + strand, within PP_3699 at 4220.626 kb on + strand, within PP_3699 at 4220.627 kb on - strand, within PP_3699 at 4220.627 kb on - strand, within PP_3699 at 4220.627 kb on - strand, within PP_3699 at 4220.627 kb on - strand, within PP_3699 at 4220.660 kb on - strand, within PP_3699 at 4220.670 kb on - strand, within PP_3699 at 4220.670 kb on - strand, within PP_3699 at 4220.707 kb on - strand, within PP_3699 at 4220.728 kb on + strand, within PP_3699 at 4220.728 kb on + strand, within PP_3699 at 4220.792 kb on + strand, within PP_3699 at 4220.801 kb on + strand, within PP_3699 at 4220.801 kb on + strand, within PP_3699 at 4220.904 kb on + strand, within PP_3699 at 4220.905 kb on - strand, within PP_3699 at 4220.951 kb on + strand, within PP_3699 at 4220.951 kb on + strand, within PP_3699 at 4220.951 kb on + strand, within PP_3699 at 4220.952 kb on - strand, within PP_3699 at 4220.952 kb on - strand, within PP_3699 at 4220.952 kb on - strand, within PP_3699 at 4221.038 kb on + strand at 4221.038 kb on + strand at 4221.038 kb on + strand at 4221.039 kb on - strand at 4221.039 kb on - strand at 4221.108 kb on + strand at 4221.167 kb on + strand at 4221.167 kb on + strand at 4221.230 kb on + strand at 4221.230 kb on + strand at 4221.231 kb on - strand at 4221.231 kb on - strand at 4221.231 kb on - strand at 4221.231 kb on - strand at 4221.234 kb on + strand at 4221.234 kb on + strand at 4221.235 kb on - strand at 4221.235 kb on - strand at 4221.294 kb on + strand at 4221.294 kb on + strand at 4221.294 kb on + strand at 4221.294 kb on + strand at 4221.294 kb on + strand at 4221.295 kb on - strand at 4221.295 kb on - strand at 4221.295 kb on - strand at 4221.306 kb on - strand at 4221.306 kb on - strand at 4221.351 kb on - strand at 4221.376 kb on - strand at 4221.382 kb on - strand at 4221.384 kb on + strand at 4221.385 kb on - strand at 4221.385 kb on - strand at 4221.404 kb on + strand at 4221.405 kb on - strand at 4221.407 kb on - strand at 4221.442 kb on + strand at 4221.442 kb on + strand at 4221.442 kb on + strand at 4221.443 kb on - strand at 4221.443 kb on - strand at 4221.494 kb on + strand at 4221.575 kb on - strand, within PP_3700 at 4221.575 kb on - strand, within PP_3700 at 4221.612 kb on + strand, within PP_3700 at 4221.612 kb on + strand, within PP_3700 at 4221.613 kb on - strand, within PP_3700 at 4221.678 kb on + strand, within PP_3700 at 4221.696 kb on - strand, within PP_3700 at 4221.696 kb on - strand, within PP_3700 at 4221.732 kb on + strand, within PP_3700 at 4221.733 kb on - strand, within PP_3700 at 4221.814 kb on - strand at 4221.847 kb on - strand at 4221.867 kb on - strand, within PP_3700 at 4221.870 kb on + strand, within PP_3700 at 4221.870 kb on + strand, within PP_3700 at 4221.870 kb on + strand, within PP_3700 at 4221.904 kb on + strand, within PP_3700 at 4221.907 kb on + strand, within PP_3700 at 4221.908 kb on - strand, within PP_3700 at 4221.909 kb on + strand, within PP_3700 at 4221.909 kb on + strand, within PP_3700 at 4221.909 kb on + strand, within PP_3700 at 4221.912 kb on - strand, within PP_3700 at 4221.918 kb on - strand at 4222.046 kb on - strand at 4222.053 kb on + strand, within PP_3700
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-3-buten-1-ol 0.1 vol% (C) remove 4,218,449 + PP_3698 0.43 +0.3 4,218,449 + PP_3698 0.43 -0.3 4,218,450 - PP_3698 0.44 +0.9 4,218,512 - PP_3698 0.48 -1.0 4,218,523 + PP_3698 0.48 +0.4 4,218,523 + +2.7 4,218,523 + PP_3698 0.48 +0.3 4,218,524 - PP_3698 0.48 +0.8 4,218,645 + PP_3698 0.57 +0.5 4,218,675 + PP_3698 0.59 -0.9 4,218,731 + PP_3698 0.62 -0.6 4,218,731 + PP_3698 0.62 +0.2 4,218,732 - PP_3698 0.62 +0.8 4,218,732 - PP_3698 0.62 +0.7 4,218,732 - PP_3698 0.62 +0.1 4,218,778 + PP_3698 0.65 +0.5 4,218,779 - PP_3698 0.65 +0.3 4,218,779 - PP_3698 0.65 -0.6 4,218,779 - PP_3698 0.65 +0.8 4,218,779 - PP_3698 0.65 -0.5 4,218,993 - PP_3698 0.80 +0.2 4,218,993 - PP_3698 0.80 +0.1 4,219,042 + PP_3698 0.83 -0.5 4,219,042 + PP_3698 0.83 +0.0 4,219,042 + PP_3698 0.83 +0.4 4,219,042 + PP_3698 0.83 -0.5 4,219,063 + PP_3698 0.84 -0.2 4,219,064 - PP_3698 0.84 -0.1 4,219,136 - PP_3698 0.89 +1.0 4,219,136 - PP_3698 0.89 +1.2 4,219,211 + +1.4 4,219,211 + +0.2 4,219,212 - -0.5 4,219,212 - -0.3 4,219,212 - -0.2 4,219,212 - -0.2 4,219,228 + -0.3 4,219,257 + -0.6 4,219,257 + +0.1 4,219,257 + -0.0 4,219,257 + -0.4 4,219,258 - -0.7 4,219,258 - +0.3 4,219,258 - +0.6 4,219,258 - +0.1 4,219,262 + -0.7 4,219,262 + +0.2 4,219,263 - -0.8 4,219,263 - -0.0 4,219,263 - +1.0 4,219,263 - -0.0 4,219,280 - +0.9 4,219,304 + -0.5 4,219,305 - +0.5 4,219,311 + +1.0 4,219,350 + -0.6 4,219,351 - -0.0 4,219,351 - -1.6 4,219,385 + -0.2 4,219,420 + +1.5 4,219,421 - +0.9 4,219,421 - +0.8 4,219,424 + +1.1 4,219,424 + +0.7 4,219,424 + -1.5 4,219,424 + -0.5 4,219,425 - -0.0 4,219,425 - +0.3 4,219,425 - +0.5 4,219,440 + -0.2 4,219,440 + +0.2 4,219,441 - +0.3 4,219,441 - -0.1 4,219,441 - -0.3 4,219,506 + +0.6 4,219,506 + +0.4 4,219,506 + -0.8 4,219,506 + +0.8 4,219,507 - +0.2 4,219,507 - +0.7 4,219,507 - +1.7 4,219,507 - -0.3 4,219,558 - +0.1 4,219,558 - +0.6 4,219,622 - PP_3699 0.11 +0.6 4,219,645 - PP_3699 0.12 +0.6 4,219,689 - PP_3699 0.15 -0.0 4,219,808 - PP_3699 0.22 -0.5 4,219,853 - PP_3699 0.24 +0.5 4,219,878 + PP_3699 0.26 -0.4 4,219,879 - PP_3699 0.26 +1.3 4,219,896 - PP_3699 0.27 +0.2 4,219,905 + PP_3699 0.28 +0.6 4,219,961 + PP_3699 0.31 +1.2 4,219,962 - PP_3699 0.31 +0.9 4,219,962 - PP_3699 0.31 +1.1 4,219,962 - PP_3699 0.31 +0.5 4,220,254 + PP_3699 0.48 +0.1 4,220,254 + PP_3699 0.48 +0.3 4,220,254 + PP_3699 0.48 +0.6 4,220,266 - PP_3699 0.49 +0.5 4,220,269 + PP_3699 0.49 +0.2 4,220,315 - PP_3699 0.52 -0.3 4,220,336 - PP_3699 0.53 +0.1 4,220,359 - PP_3699 0.54 +0.2 4,220,399 + PP_3699 0.56 +1.0 4,220,399 + PP_3699 0.56 -1.5 4,220,400 - PP_3699 0.57 -0.2 4,220,471 + PP_3699 0.61 +0.7 4,220,471 + PP_3699 0.61 +1.8 4,220,472 - +0.7 4,220,515 + PP_3699 0.63 -0.1 4,220,515 + PP_3699 0.63 -0.6 4,220,516 - PP_3699 0.63 +0.3 4,220,516 - PP_3699 0.63 +0.8 4,220,516 - PP_3699 0.63 -0.6 4,220,531 + PP_3699 0.64 +0.8 4,220,531 + PP_3699 0.64 +0.2 4,220,532 - PP_3699 0.64 -1.2 4,220,532 - PP_3699 0.64 +0.2 4,220,532 - PP_3699 0.64 -0.2 4,220,554 + PP_3699 0.66 -0.3 4,220,554 + PP_3699 0.66 -0.0 4,220,555 - PP_3699 0.66 +0.6 4,220,576 + PP_3699 0.67 +2.1 4,220,577 - PP_3699 0.67 -0.0 4,220,626 + PP_3699 0.70 +0.6 4,220,626 + PP_3699 0.70 +0.6 4,220,626 + PP_3699 0.70 -0.2 4,220,627 - PP_3699 0.70 -0.9 4,220,627 - PP_3699 0.70 -0.0 4,220,627 - PP_3699 0.70 +0.2 4,220,627 - PP_3699 0.70 +0.1 4,220,660 - PP_3699 0.72 -0.1 4,220,670 - PP_3699 0.72 -0.1 4,220,670 - PP_3699 0.72 +0.5 4,220,707 - PP_3699 0.75 +0.3 4,220,728 + PP_3699 0.76 -0.2 4,220,728 + PP_3699 0.76 +0.9 4,220,792 + PP_3699 0.79 +1.2 4,220,801 + PP_3699 0.80 +0.6 4,220,801 + PP_3699 0.80 +0.3 4,220,904 + PP_3699 0.86 -0.1 4,220,905 - PP_3699 0.86 +0.9 4,220,951 + PP_3699 0.89 -0.8 4,220,951 + PP_3699 0.89 +0.1 4,220,951 + PP_3699 0.89 -0.4 4,220,952 - PP_3699 0.89 +0.7 4,220,952 - PP_3699 0.89 +0.0 4,220,952 - PP_3699 0.89 +0.5 4,221,038 + -0.0 4,221,038 + -0.6 4,221,038 + +0.4 4,221,039 - +1.1 4,221,039 - -0.4 4,221,108 + -0.0 4,221,167 + +0.1 4,221,167 + +0.3 4,221,230 + +0.4 4,221,230 + +0.5 4,221,231 - +0.2 4,221,231 - +0.3 4,221,231 - +0.4 4,221,231 - +0.1 4,221,234 + -0.4 4,221,234 + -0.1 4,221,235 - +1.4 4,221,235 - +0.7 4,221,294 + +1.8 4,221,294 + -0.1 4,221,294 + +1.0 4,221,294 + +0.5 4,221,294 + -0.8 4,221,295 - +0.7 4,221,295 - -0.6 4,221,295 - +0.8 4,221,306 - +1.1 4,221,306 - -1.2 4,221,351 - +0.5 4,221,376 - +0.3 4,221,382 - +0.5 4,221,384 + +0.6 4,221,385 - +1.0 4,221,385 - +0.0 4,221,404 + +0.1 4,221,405 - +0.2 4,221,407 - +0.4 4,221,442 + +0.4 4,221,442 + +0.1 4,221,442 + +1.1 4,221,443 - -0.4 4,221,443 - +0.4 4,221,494 + +0.6 4,221,575 - PP_3700 0.16 -0.1 4,221,575 - PP_3700 0.16 -1.5 4,221,612 + PP_3700 0.19 +0.9 4,221,612 + PP_3700 0.19 +0.4 4,221,613 - PP_3700 0.19 +0.4 4,221,678 + PP_3700 0.25 +0.2 4,221,696 - PP_3700 0.26 -0.7 4,221,696 - PP_3700 0.26 -0.2 4,221,732 + PP_3700 0.30 -0.2 4,221,733 - PP_3700 0.30 +0.3 4,221,814 - +1.1 4,221,847 - +0.3 4,221,867 - PP_3700 0.42 -0.1 4,221,870 + PP_3700 0.42 -0.1 4,221,870 + PP_3700 0.42 +1.4 4,221,870 + PP_3700 0.42 +0.6 4,221,904 + PP_3700 0.45 -0.2 4,221,907 + PP_3700 0.46 -0.4 4,221,908 - PP_3700 0.46 +0.0 4,221,909 + PP_3700 0.46 +0.2 4,221,909 + PP_3700 0.46 +0.3 4,221,909 + PP_3700 0.46 +1.5 4,221,912 - PP_3700 0.46 -1.2 4,221,918 - +0.2 4,222,046 - +0.8 4,222,053 + PP_3700 0.59 +0.6
Or see this region's nucleotide sequence