Experiment: KB with Lupeol 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4118 and Psyr_4119 are separated by 281 nucleotides Psyr_4119 and Psyr_4120 are separated by 14 nucleotides Psyr_4120 and Psyr_4121 are separated by 396 nucleotides
Psyr_4118: Psyr_4118 - Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal, at 4,907,791 to 4,908,408
_4118
Psyr_4119: Psyr_4119 - SSU ribosomal protein S9P, at 4,908,690 to 4,909,082
_4119
Psyr_4120: Psyr_4120 - LSU ribosomal protein L13P, at 4,909,097 to 4,909,525
_4120
Psyr_4121: Psyr_4121 - transcriptional regulator, AraC family with amidase-like domain protein, at 4,909,922 to 4,910,926
_4121
Position (kb) 4909
4910 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4908.213 kb on - strand, within Psyr_4118 at 4908.213 kb on - strand, within Psyr_4118 at 4908.262 kb on + strand, within Psyr_4118 at 4908.263 kb on - strand, within Psyr_4118 at 4908.380 kb on + strand at 4908.518 kb on + strand at 4908.518 kb on + strand at 4908.518 kb on + strand at 4908.518 kb on + strand at 4908.519 kb on - strand at 4908.537 kb on - strand at 4908.617 kb on + strand at 4909.792 kb on - strand at 4909.801 kb on - strand at 4909.906 kb on + strand at 4909.908 kb on + strand at 4909.908 kb on + strand at 4909.909 kb on - strand at 4909.909 kb on - strand at 4909.921 kb on + strand at 4909.922 kb on - strand at 4909.922 kb on - strand at 4909.956 kb on + strand at 4909.957 kb on - strand at 4910.339 kb on + strand, within Psyr_4121 at 4910.339 kb on + strand, within Psyr_4121 at 4910.340 kb on - strand, within Psyr_4121 at 4910.426 kb on + strand, within Psyr_4121 at 4910.427 kb on - strand, within Psyr_4121 at 4910.427 kb on - strand, within Psyr_4121 at 4910.427 kb on - strand, within Psyr_4121 at 4910.462 kb on + strand, within Psyr_4121 at 4910.463 kb on - strand, within Psyr_4121 at 4910.463 kb on - strand, within Psyr_4121 at 4910.463 kb on - strand, within Psyr_4121 at 4910.468 kb on + strand, within Psyr_4121 at 4910.469 kb on - strand, within Psyr_4121
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Lupeol 10 mM remove 4,908,213 - Psyr_4118 0.68 +0.4 4,908,213 - Psyr_4118 0.68 +1.7 4,908,262 + Psyr_4118 0.76 -0.3 4,908,263 - Psyr_4118 0.76 +0.8 4,908,380 + +1.1 4,908,518 + -1.0 4,908,518 + -0.3 4,908,518 + -1.0 4,908,518 + +1.3 4,908,519 - +0.7 4,908,537 - -0.6 4,908,617 + -0.5 4,909,792 - +0.3 4,909,801 - +0.3 4,909,906 + +0.4 4,909,908 + -1.9 4,909,908 + -0.3 4,909,909 - -1.1 4,909,909 - -0.9 4,909,921 + -0.6 4,909,922 - +0.9 4,909,922 - -0.7 4,909,956 + -0.5 4,909,957 - +0.9 4,910,339 + Psyr_4121 0.41 +2.6 4,910,339 + Psyr_4121 0.41 -0.1 4,910,340 - Psyr_4121 0.42 +0.4 4,910,426 + Psyr_4121 0.50 +3.3 4,910,427 - Psyr_4121 0.50 -0.5 4,910,427 - Psyr_4121 0.50 +1.3 4,910,427 - Psyr_4121 0.50 +0.4 4,910,462 + Psyr_4121 0.54 +0.1 4,910,463 - Psyr_4121 0.54 +0.4 4,910,463 - Psyr_4121 0.54 +1.3 4,910,463 - Psyr_4121 0.54 +1.0 4,910,468 + Psyr_4121 0.54 -1.1 4,910,469 - Psyr_4121 0.54 -0.7
Or see this region's nucleotide sequence