Experiment: KB with Nonanoic 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4511 and Psyr_4512 overlap by 45 nucleotides Psyr_4512 and Psyr_4513 are separated by 69 nucleotides
Psyr_4511: Psyr_4511 - hypothetical protein, at 5,374,960 to 5,376,048
_4511
Psyr_4512: Psyr_4512 - putative phage-related protein, at 5,376,004 to 5,376,594
_4512
Psyr_4513: Psyr_4513 - hypothetical protein, at 5,376,664 to 5,377,077
_4513
Position (kb) 5376
5377 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 5375.066 kb on + strand at 5375.077 kb on + strand, within Psyr_4511 at 5375.077 kb on + strand, within Psyr_4511 at 5375.077 kb on + strand, within Psyr_4511 at 5375.077 kb on + strand, within Psyr_4511 at 5375.077 kb on + strand, within Psyr_4511 at 5375.077 kb on + strand, within Psyr_4511 at 5375.077 kb on + strand, within Psyr_4511 at 5375.078 kb on - strand, within Psyr_4511 at 5375.078 kb on - strand, within Psyr_4511 at 5375.078 kb on - strand, within Psyr_4511 at 5375.103 kb on - strand, within Psyr_4511 at 5375.134 kb on - strand, within Psyr_4511 at 5375.134 kb on - strand, within Psyr_4511 at 5375.163 kb on + strand, within Psyr_4511 at 5375.255 kb on + strand, within Psyr_4511 at 5375.256 kb on - strand, within Psyr_4511 at 5375.256 kb on - strand, within Psyr_4511 at 5375.291 kb on + strand, within Psyr_4511 at 5375.364 kb on - strand, within Psyr_4511 at 5375.399 kb on - strand, within Psyr_4511 at 5375.436 kb on + strand, within Psyr_4511 at 5375.439 kb on + strand, within Psyr_4511 at 5375.539 kb on - strand, within Psyr_4511 at 5375.588 kb on + strand, within Psyr_4511 at 5375.690 kb on - strand, within Psyr_4511 at 5375.704 kb on + strand, within Psyr_4511 at 5375.735 kb on - strand, within Psyr_4511 at 5375.815 kb on + strand, within Psyr_4511 at 5375.815 kb on + strand, within Psyr_4511 at 5375.816 kb on - strand, within Psyr_4511 at 5375.816 kb on - strand, within Psyr_4511 at 5375.816 kb on - strand, within Psyr_4511 at 5375.817 kb on + strand, within Psyr_4511 at 5375.819 kb on + strand, within Psyr_4511 at 5375.915 kb on - strand, within Psyr_4511 at 5375.932 kb on + strand, within Psyr_4511 at 5375.932 kb on + strand, within Psyr_4511 at 5375.932 kb on + strand, within Psyr_4511 at 5375.932 kb on + strand, within Psyr_4511 at 5375.932 kb on + strand, within Psyr_4511 at 5375.932 kb on + strand, within Psyr_4511 at 5375.932 kb on + strand, within Psyr_4511 at 5375.932 kb on + strand, within Psyr_4511 at 5375.933 kb on - strand, within Psyr_4511 at 5375.933 kb on - strand, within Psyr_4511 at 5375.933 kb on - strand, within Psyr_4511 at 5375.933 kb on - strand, within Psyr_4511 at 5375.951 kb on - strand at 5375.951 kb on - strand at 5375.951 kb on - strand at 5375.951 kb on - strand at 5376.024 kb on + strand at 5376.024 kb on + strand at 5376.024 kb on + strand at 5376.025 kb on - strand at 5376.025 kb on - strand at 5376.046 kb on + strand at 5376.097 kb on - strand, within Psyr_4512 at 5376.260 kb on + strand, within Psyr_4512 at 5376.260 kb on + strand, within Psyr_4512 at 5376.261 kb on - strand, within Psyr_4512 at 5376.292 kb on - strand, within Psyr_4512 at 5376.295 kb on + strand, within Psyr_4512 at 5376.296 kb on - strand, within Psyr_4512 at 5376.327 kb on + strand, within Psyr_4512 at 5376.342 kb on + strand, within Psyr_4512 at 5376.358 kb on - strand, within Psyr_4512 at 5376.358 kb on - strand, within Psyr_4512 at 5376.366 kb on + strand, within Psyr_4512 at 5376.366 kb on + strand, within Psyr_4512 at 5376.366 kb on + strand, within Psyr_4512 at 5376.367 kb on - strand, within Psyr_4512 at 5376.407 kb on - strand, within Psyr_4512 at 5376.447 kb on - strand, within Psyr_4512 at 5376.475 kb on + strand, within Psyr_4512 at 5376.476 kb on - strand, within Psyr_4512 at 5376.476 kb on - strand, within Psyr_4512 at 5376.476 kb on - strand, within Psyr_4512 at 5376.476 kb on - strand, within Psyr_4512 at 5376.493 kb on - strand, within Psyr_4512 at 5376.534 kb on + strand, within Psyr_4512 at 5376.535 kb on - strand, within Psyr_4512 at 5376.687 kb on + strand at 5376.711 kb on + strand, within Psyr_4513 at 5376.720 kb on - strand, within Psyr_4513 at 5376.731 kb on + strand, within Psyr_4513 at 5376.731 kb on + strand, within Psyr_4513 at 5376.731 kb on + strand, within Psyr_4513 at 5376.731 kb on + strand, within Psyr_4513 at 5376.731 kb on + strand, within Psyr_4513 at 5376.732 kb on - strand, within Psyr_4513 at 5376.732 kb on - strand, within Psyr_4513 at 5376.732 kb on - strand, within Psyr_4513 at 5376.732 kb on - strand, within Psyr_4513 at 5376.750 kb on + strand, within Psyr_4513 at 5376.751 kb on - strand, within Psyr_4513 at 5376.756 kb on + strand, within Psyr_4513 at 5376.756 kb on + strand, within Psyr_4513 at 5376.756 kb on + strand, within Psyr_4513 at 5376.757 kb on - strand, within Psyr_4513 at 5376.759 kb on + strand, within Psyr_4513 at 5376.759 kb on + strand, within Psyr_4513 at 5376.759 kb on + strand, within Psyr_4513 at 5376.759 kb on + strand, within Psyr_4513 at 5376.760 kb on - strand, within Psyr_4513 at 5376.760 kb on - strand, within Psyr_4513 at 5376.953 kb on + strand, within Psyr_4513 at 5376.953 kb on + strand, within Psyr_4513 at 5376.953 kb on + strand, within Psyr_4513 at 5376.953 kb on + strand, within Psyr_4513 at 5376.953 kb on + strand, within Psyr_4513 at 5376.954 kb on - strand, within Psyr_4513 at 5376.954 kb on - strand, within Psyr_4513 at 5376.954 kb on - strand, within Psyr_4513 at 5376.954 kb on - strand, within Psyr_4513 at 5377.064 kb on + strand at 5377.064 kb on + strand at 5377.105 kb on + strand at 5377.105 kb on + strand at 5377.105 kb on + strand at 5377.125 kb on + strand at 5377.126 kb on - strand at 5377.223 kb on + strand at 5377.223 kb on + strand at 5377.223 kb on + strand at 5377.224 kb on - strand at 5377.224 kb on - strand at 5377.224 kb on - strand at 5377.226 kb on + strand at 5377.226 kb on + strand at 5377.285 kb on + strand at 5377.286 kb on - strand at 5377.286 kb on - strand at 5377.286 kb on - strand at 5377.360 kb on + strand at 5377.360 kb on + strand at 5377.360 kb on + strand at 5377.361 kb on - strand at 5377.361 kb on - strand at 5377.454 kb on - strand at 5377.454 kb on - strand at 5377.490 kb on + strand at 5377.490 kb on + strand at 5377.490 kb on + strand at 5377.491 kb on - strand at 5377.491 kb on - strand at 5377.491 kb on - strand at 5377.491 kb on - strand at 5377.527 kb on + strand at 5377.527 kb on + strand at 5377.528 kb on - strand at 5377.528 kb on - strand at 5377.528 kb on - strand at 5377.531 kb on + strand at 5377.531 kb on + strand at 5377.532 kb on - strand at 5377.532 kb on - strand at 5377.532 kb on - strand at 5377.532 kb on - strand at 5377.532 kb on - strand at 5377.535 kb on + strand at 5377.535 kb on + strand at 5377.536 kb on - strand at 5377.536 kb on - strand at 5377.536 kb on - strand at 5377.536 kb on - strand at 5377.536 kb on - strand at 5377.540 kb on - strand at 5377.547 kb on + strand at 5377.561 kb on - strand at 5377.563 kb on + strand at 5377.563 kb on + strand at 5377.563 kb on + strand at 5377.563 kb on + strand at 5377.564 kb on - strand at 5377.564 kb on - strand at 5377.564 kb on - strand at 5377.564 kb on - strand at 5377.572 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Nonanoic 10 mM remove 5,375,066 + +1.3 5,375,077 + Psyr_4511 0.11 +1.3 5,375,077 + Psyr_4511 0.11 +2.6 5,375,077 + Psyr_4511 0.11 +0.1 5,375,077 + Psyr_4511 0.11 -1.3 5,375,077 + Psyr_4511 0.11 +1.8 5,375,077 + Psyr_4511 0.11 -0.7 5,375,077 + Psyr_4511 0.11 +1.0 5,375,078 - Psyr_4511 0.11 -0.0 5,375,078 - Psyr_4511 0.11 -0.4 5,375,078 - Psyr_4511 0.11 -0.5 5,375,103 - Psyr_4511 0.13 +1.3 5,375,134 - Psyr_4511 0.16 -0.3 5,375,134 - Psyr_4511 0.16 -0.5 5,375,163 + Psyr_4511 0.19 -1.9 5,375,255 + Psyr_4511 0.27 +1.8 5,375,256 - Psyr_4511 0.27 +0.4 5,375,256 - Psyr_4511 0.27 -1.0 5,375,291 + Psyr_4511 0.30 -0.4 5,375,364 - Psyr_4511 0.37 +0.3 5,375,399 - Psyr_4511 0.40 +0.2 5,375,436 + Psyr_4511 0.44 +0.2 5,375,439 + Psyr_4511 0.44 +0.4 5,375,539 - Psyr_4511 0.53 +0.3 5,375,588 + Psyr_4511 0.58 -0.5 5,375,690 - Psyr_4511 0.67 -0.2 5,375,704 + Psyr_4511 0.68 -2.4 5,375,735 - Psyr_4511 0.71 +0.3 5,375,815 + Psyr_4511 0.79 -0.7 5,375,815 + Psyr_4511 0.79 +0.3 5,375,816 - Psyr_4511 0.79 +0.7 5,375,816 - Psyr_4511 0.79 -0.2 5,375,816 - Psyr_4511 0.79 -0.5 5,375,817 + Psyr_4511 0.79 -1.1 5,375,819 + Psyr_4511 0.79 +0.7 5,375,915 - Psyr_4511 0.88 -0.4 5,375,932 + Psyr_4511 0.89 +1.3 5,375,932 + Psyr_4511 0.89 +0.1 5,375,932 + Psyr_4511 0.89 -0.0 5,375,932 + Psyr_4511 0.89 +0.8 5,375,932 + Psyr_4511 0.89 +0.4 5,375,932 + Psyr_4511 0.89 -1.4 5,375,932 + Psyr_4511 0.89 +0.4 5,375,932 + Psyr_4511 0.89 -2.4 5,375,933 - Psyr_4511 0.89 +0.3 5,375,933 - Psyr_4511 0.89 -0.2 5,375,933 - Psyr_4511 0.89 -3.6 5,375,933 - Psyr_4511 0.89 +1.0 5,375,951 - -0.8 5,375,951 - -0.3 5,375,951 - -0.3 5,375,951 - -1.3 5,376,024 + +1.0 5,376,024 + -0.8 5,376,024 + -0.9 5,376,025 - -0.3 5,376,025 - +0.3 5,376,046 + -0.3 5,376,097 - Psyr_4512 0.16 -1.0 5,376,260 + Psyr_4512 0.43 -0.1 5,376,260 + Psyr_4512 0.43 -2.6 5,376,261 - Psyr_4512 0.43 -2.5 5,376,292 - Psyr_4512 0.49 -1.9 5,376,295 + Psyr_4512 0.49 -4.4 5,376,296 - Psyr_4512 0.49 +0.2 5,376,327 + Psyr_4512 0.55 -1.6 5,376,342 + Psyr_4512 0.57 -1.4 5,376,358 - Psyr_4512 0.60 -0.1 5,376,358 - Psyr_4512 0.60 +0.3 5,376,366 + Psyr_4512 0.61 -1.2 5,376,366 + Psyr_4512 0.61 -0.7 5,376,366 + Psyr_4512 0.61 +1.6 5,376,367 - Psyr_4512 0.61 -1.3 5,376,407 - Psyr_4512 0.68 +1.3 5,376,447 - Psyr_4512 0.75 -0.3 5,376,475 + Psyr_4512 0.80 +0.7 5,376,476 - Psyr_4512 0.80 -0.1 5,376,476 - Psyr_4512 0.80 +2.9 5,376,476 - Psyr_4512 0.80 -2.1 5,376,476 - Psyr_4512 0.80 -1.1 5,376,493 - Psyr_4512 0.83 +0.9 5,376,534 + Psyr_4512 0.90 -0.5 5,376,535 - Psyr_4512 0.90 -1.5 5,376,687 + -0.2 5,376,711 + Psyr_4513 0.11 -0.4 5,376,720 - Psyr_4513 0.14 +0.2 5,376,731 + Psyr_4513 0.16 -0.8 5,376,731 + Psyr_4513 0.16 +0.8 5,376,731 + Psyr_4513 0.16 +1.9 5,376,731 + Psyr_4513 0.16 +0.4 5,376,731 + Psyr_4513 0.16 -0.2 5,376,732 - Psyr_4513 0.16 +1.6 5,376,732 - Psyr_4513 0.16 +1.2 5,376,732 - Psyr_4513 0.16 -1.1 5,376,732 - Psyr_4513 0.16 -0.3 5,376,750 + Psyr_4513 0.21 +1.3 5,376,751 - Psyr_4513 0.21 -0.1 5,376,756 + Psyr_4513 0.22 -0.6 5,376,756 + Psyr_4513 0.22 -1.9 5,376,756 + Psyr_4513 0.22 +0.0 5,376,757 - Psyr_4513 0.22 -0.5 5,376,759 + Psyr_4513 0.23 +1.3 5,376,759 + Psyr_4513 0.23 -1.0 5,376,759 + Psyr_4513 0.23 -0.5 5,376,759 + Psyr_4513 0.23 -0.1 5,376,760 - Psyr_4513 0.23 -0.5 5,376,760 - Psyr_4513 0.23 +1.0 5,376,953 + Psyr_4513 0.70 -1.1 5,376,953 + Psyr_4513 0.70 -0.0 5,376,953 + Psyr_4513 0.70 +2.2 5,376,953 + Psyr_4513 0.70 +1.9 5,376,953 + Psyr_4513 0.70 +0.0 5,376,954 - Psyr_4513 0.70 -1.2 5,376,954 - Psyr_4513 0.70 +1.5 5,376,954 - Psyr_4513 0.70 -0.7 5,376,954 - Psyr_4513 0.70 -0.5 5,377,064 + +0.8 5,377,064 + +0.1 5,377,105 + -0.4 5,377,105 + +0.5 5,377,105 + -0.8 5,377,125 + -0.2 5,377,126 - -1.4 5,377,223 + +1.1 5,377,223 + -0.5 5,377,223 + +0.1 5,377,224 - -0.2 5,377,224 - +0.3 5,377,224 - -0.2 5,377,226 + -0.3 5,377,226 + +0.2 5,377,285 + +0.2 5,377,286 - +0.3 5,377,286 - -1.0 5,377,286 - +1.9 5,377,360 + -0.0 5,377,360 + +1.3 5,377,360 + +0.1 5,377,361 - +0.9 5,377,361 - -0.9 5,377,454 - +1.1 5,377,454 - -0.6 5,377,490 + +0.3 5,377,490 + -0.5 5,377,490 + +0.8 5,377,491 - -0.1 5,377,491 - +1.2 5,377,491 - -2.7 5,377,491 - -1.1 5,377,527 + +0.9 5,377,527 + -0.4 5,377,528 - -1.8 5,377,528 - +1.0 5,377,528 - +0.5 5,377,531 + +1.3 5,377,531 + -0.0 5,377,532 - +1.3 5,377,532 - -0.5 5,377,532 - +0.1 5,377,532 - +1.7 5,377,532 - -0.4 5,377,535 + +1.8 5,377,535 + +0.3 5,377,536 - -0.3 5,377,536 - +1.6 5,377,536 - +0.1 5,377,536 - +1.0 5,377,536 - -1.2 5,377,540 - -2.2 5,377,547 + +0.1 5,377,561 - +4.9 5,377,563 + -2.2 5,377,563 + -1.0 5,377,563 + -0.3 5,377,563 + -0.7 5,377,564 - -0.3 5,377,564 - +0.1 5,377,564 - -1.4 5,377,564 - -1.3 5,377,572 + -0.3
Or see this region's nucleotide sequence