Experiment: KB with Nonanoic 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3771 and Psyr_3772 are separated by 55 nucleotides Psyr_3772 and Psyr_3773 are separated by 249 nucleotides
Psyr_3771: Psyr_3771 - conserved hypothetical protein, at 4,490,038 to 4,491,201
_3771
Psyr_3772: Psyr_3772 - conserved hypothetical protein, at 4,491,257 to 4,491,577
_3772
Psyr_3773: Psyr_3773 - GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal, at 4,491,827 to 4,493,011
_3773
Position (kb) 4491
4492 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4490.268 kb on - strand, within Psyr_3771 at 4490.268 kb on - strand, within Psyr_3771 at 4490.373 kb on - strand, within Psyr_3771 at 4490.405 kb on + strand, within Psyr_3771 at 4490.405 kb on + strand, within Psyr_3771 at 4490.406 kb on - strand, within Psyr_3771 at 4490.427 kb on + strand, within Psyr_3771 at 4490.428 kb on - strand, within Psyr_3771 at 4490.522 kb on + strand, within Psyr_3771 at 4490.530 kb on + strand, within Psyr_3771 at 4490.530 kb on + strand, within Psyr_3771 at 4490.530 kb on + strand, within Psyr_3771 at 4490.530 kb on + strand, within Psyr_3771 at 4490.531 kb on - strand, within Psyr_3771 at 4490.531 kb on - strand, within Psyr_3771 at 4490.594 kb on + strand, within Psyr_3771 at 4490.594 kb on + strand, within Psyr_3771 at 4490.594 kb on + strand, within Psyr_3771 at 4490.595 kb on - strand, within Psyr_3771 at 4490.595 kb on - strand, within Psyr_3771 at 4490.858 kb on + strand, within Psyr_3771 at 4490.859 kb on - strand, within Psyr_3771 at 4490.867 kb on + strand, within Psyr_3771 at 4490.867 kb on + strand, within Psyr_3771 at 4490.867 kb on + strand, within Psyr_3771 at 4490.867 kb on + strand, within Psyr_3771 at 4490.867 kb on + strand, within Psyr_3771 at 4490.867 kb on + strand, within Psyr_3771 at 4490.868 kb on - strand, within Psyr_3771 at 4490.868 kb on - strand, within Psyr_3771 at 4490.868 kb on - strand, within Psyr_3771 at 4490.868 kb on - strand, within Psyr_3771 at 4490.868 kb on - strand, within Psyr_3771 at 4491.117 kb on - strand at 4491.169 kb on - strand at 4491.169 kb on - strand at 4491.169 kb on - strand at 4491.289 kb on + strand, within Psyr_3772 at 4491.290 kb on - strand, within Psyr_3772 at 4491.290 kb on - strand, within Psyr_3772 at 4491.456 kb on + strand, within Psyr_3772 at 4491.456 kb on + strand, within Psyr_3772 at 4491.581 kb on + strand at 4491.582 kb on - strand at 4491.828 kb on + strand at 4491.828 kb on + strand at 4491.829 kb on - strand at 4491.829 kb on - strand at 4491.829 kb on - strand at 4491.847 kb on + strand at 4491.848 kb on - strand at 4491.848 kb on - strand at 4491.898 kb on + strand at 4491.898 kb on + strand at 4491.898 kb on + strand at 4491.933 kb on + strand at 4491.933 kb on + strand at 4491.933 kb on + strand at 4491.934 kb on - strand at 4491.934 kb on - strand at 4491.934 kb on - strand at 4492.303 kb on + strand, within Psyr_3773
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Nonanoic 10 mM remove 4,490,268 - Psyr_3771 0.20 -0.2 4,490,268 - Psyr_3771 0.20 -0.7 4,490,373 - Psyr_3771 0.29 +0.2 4,490,405 + Psyr_3771 0.32 -0.7 4,490,405 + Psyr_3771 0.32 +1.5 4,490,406 - Psyr_3771 0.32 +0.4 4,490,427 + Psyr_3771 0.33 +0.9 4,490,428 - Psyr_3771 0.34 +0.8 4,490,522 + Psyr_3771 0.42 +0.4 4,490,530 + Psyr_3771 0.42 -0.7 4,490,530 + Psyr_3771 0.42 -0.6 4,490,530 + Psyr_3771 0.42 +0.9 4,490,530 + Psyr_3771 0.42 +0.0 4,490,531 - Psyr_3771 0.42 -0.9 4,490,531 - Psyr_3771 0.42 -1.6 4,490,594 + Psyr_3771 0.48 -1.2 4,490,594 + Psyr_3771 0.48 -2.6 4,490,594 + Psyr_3771 0.48 +0.2 4,490,595 - Psyr_3771 0.48 -2.2 4,490,595 - Psyr_3771 0.48 +0.9 4,490,858 + Psyr_3771 0.70 +0.7 4,490,859 - Psyr_3771 0.71 +0.7 4,490,867 + Psyr_3771 0.71 +0.9 4,490,867 + Psyr_3771 0.71 -0.0 4,490,867 + Psyr_3771 0.71 -1.3 4,490,867 + Psyr_3771 0.71 +2.0 4,490,867 + Psyr_3771 0.71 -0.5 4,490,867 + Psyr_3771 0.71 -0.2 4,490,868 - Psyr_3771 0.71 -1.5 4,490,868 - Psyr_3771 0.71 -2.7 4,490,868 - Psyr_3771 0.71 +0.4 4,490,868 - Psyr_3771 0.71 -0.1 4,490,868 - Psyr_3771 0.71 +0.7 4,491,117 - -0.6 4,491,169 - +1.1 4,491,169 - -0.6 4,491,169 - -1.6 4,491,289 + Psyr_3772 0.10 -1.7 4,491,290 - Psyr_3772 0.10 +0.8 4,491,290 - Psyr_3772 0.10 -1.6 4,491,456 + Psyr_3772 0.62 +1.6 4,491,456 + Psyr_3772 0.62 -1.3 4,491,581 + -0.3 4,491,582 - +0.2 4,491,828 + -1.0 4,491,828 + -2.0 4,491,829 - +2.7 4,491,829 - +0.1 4,491,829 - +1.3 4,491,847 + -2.6 4,491,848 - -0.8 4,491,848 - -0.7 4,491,898 + -0.3 4,491,898 + -1.8 4,491,898 + +0.0 4,491,933 + +0.0 4,491,933 + +0.9 4,491,933 + +0.4 4,491,934 - -0.3 4,491,934 - -0.7 4,491,934 - +0.5 4,492,303 + Psyr_3773 0.40 -0.2
Or see this region's nucleotide sequence