Experiment: KB with Prenyletin 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4590 and Psyr_4591 are separated by 3 nucleotides Psyr_4591 and Psyr_4592 overlap by 4 nucleotides
Psyr_4590: Psyr_4590 - Bacteriophage Mu P, at 5,449,796 to 5,450,923
_4590
Psyr_4591: Psyr_4591 - DNA circulation, N-terminal, at 5,450,927 to 5,452,339
_4591
Psyr_4592: Psyr_4592 - Phage tail tape measure protein TP901, core region, at 5,452,336 to 5,454,495
_4592
Position (kb) 5450
5451
5452
5453 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5449.953 kb on + strand, within Psyr_4590 at 5449.953 kb on + strand, within Psyr_4590 at 5449.954 kb on - strand, within Psyr_4590 at 5449.987 kb on + strand, within Psyr_4590 at 5449.988 kb on - strand, within Psyr_4590 at 5450.026 kb on + strand, within Psyr_4590 at 5450.026 kb on + strand, within Psyr_4590 at 5450.027 kb on - strand, within Psyr_4590 at 5450.073 kb on + strand, within Psyr_4590 at 5450.073 kb on + strand, within Psyr_4590 at 5450.073 kb on + strand, within Psyr_4590 at 5450.073 kb on + strand, within Psyr_4590 at 5450.073 kb on + strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.191 kb on + strand, within Psyr_4590 at 5450.526 kb on - strand, within Psyr_4590 at 5450.688 kb on + strand, within Psyr_4590 at 5450.688 kb on + strand, within Psyr_4590 at 5450.688 kb on + strand, within Psyr_4590 at 5450.689 kb on - strand, within Psyr_4590 at 5450.689 kb on - strand, within Psyr_4590 at 5450.689 kb on - strand, within Psyr_4590 at 5450.689 kb on - strand, within Psyr_4590 at 5450.806 kb on + strand, within Psyr_4590 at 5450.912 kb on - strand at 5451.153 kb on + strand, within Psyr_4591 at 5451.154 kb on - strand, within Psyr_4591 at 5451.154 kb on - strand, within Psyr_4591 at 5451.532 kb on + strand, within Psyr_4591 at 5451.707 kb on - strand, within Psyr_4591 at 5451.771 kb on + strand, within Psyr_4591 at 5451.771 kb on + strand, within Psyr_4591 at 5451.815 kb on + strand, within Psyr_4591 at 5451.815 kb on + strand, within Psyr_4591 at 5451.815 kb on + strand, within Psyr_4591 at 5451.816 kb on - strand, within Psyr_4591 at 5451.848 kb on - strand, within Psyr_4591 at 5451.848 kb on - strand, within Psyr_4591 at 5451.848 kb on - strand, within Psyr_4591 at 5451.848 kb on - strand, within Psyr_4591 at 5452.036 kb on + strand, within Psyr_4591 at 5452.177 kb on + strand, within Psyr_4591 at 5452.178 kb on - strand, within Psyr_4591 at 5452.213 kb on - strand at 5452.213 kb on - strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.538 kb on - strand at 5452.762 kb on + strand, within Psyr_4592 at 5452.762 kb on + strand, within Psyr_4592 at 5452.762 kb on + strand, within Psyr_4592 at 5452.763 kb on - strand, within Psyr_4592 at 5453.113 kb on + strand, within Psyr_4592 at 5453.113 kb on + strand, within Psyr_4592 at 5453.114 kb on - strand, within Psyr_4592 at 5453.114 kb on - strand, within Psyr_4592 at 5453.114 kb on - strand, within Psyr_4592 at 5453.114 kb on - strand, within Psyr_4592 at 5453.114 kb on - strand, within Psyr_4592 at 5453.114 kb on - strand, within Psyr_4592 at 5453.168 kb on + strand, within Psyr_4592 at 5453.169 kb on - strand, within Psyr_4592 at 5453.169 kb on - strand, within Psyr_4592
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Prenyletin 10 mM remove 5,449,953 + Psyr_4590 0.14 -0.2 5,449,953 + Psyr_4590 0.14 +0.7 5,449,954 - Psyr_4590 0.14 +0.8 5,449,987 + Psyr_4590 0.17 +1.4 5,449,988 - Psyr_4590 0.17 +0.3 5,450,026 + Psyr_4590 0.20 +0.5 5,450,026 + Psyr_4590 0.20 -0.1 5,450,027 - Psyr_4590 0.20 +0.3 5,450,073 + Psyr_4590 0.25 +0.1 5,450,073 + Psyr_4590 0.25 -0.5 5,450,073 + Psyr_4590 0.25 -0.4 5,450,073 + Psyr_4590 0.25 +0.4 5,450,073 + Psyr_4590 0.25 -2.7 5,450,074 - Psyr_4590 0.25 -0.8 5,450,074 - Psyr_4590 0.25 -0.6 5,450,074 - Psyr_4590 0.25 -0.7 5,450,074 - Psyr_4590 0.25 -0.2 5,450,074 - Psyr_4590 0.25 -0.4 5,450,074 - Psyr_4590 0.25 +0.6 5,450,074 - Psyr_4590 0.25 -0.6 5,450,074 - Psyr_4590 0.25 +0.5 5,450,074 - Psyr_4590 0.25 +0.1 5,450,074 - Psyr_4590 0.25 +0.4 5,450,074 - Psyr_4590 0.25 -1.8 5,450,074 - Psyr_4590 0.25 +1.0 5,450,191 + Psyr_4590 0.35 +0.2 5,450,526 - Psyr_4590 0.65 +1.0 5,450,688 + Psyr_4590 0.79 -0.7 5,450,688 + Psyr_4590 0.79 +0.5 5,450,688 + Psyr_4590 0.79 -1.2 5,450,689 - Psyr_4590 0.79 -1.0 5,450,689 - Psyr_4590 0.79 -0.1 5,450,689 - Psyr_4590 0.79 -0.2 5,450,689 - Psyr_4590 0.79 +0.9 5,450,806 + Psyr_4590 0.90 -1.7 5,450,912 - +0.1 5,451,153 + Psyr_4591 0.16 +0.2 5,451,154 - Psyr_4591 0.16 +0.8 5,451,154 - Psyr_4591 0.16 -0.5 5,451,532 + Psyr_4591 0.43 +2.2 5,451,707 - Psyr_4591 0.55 +0.8 5,451,771 + Psyr_4591 0.60 +0.1 5,451,771 + Psyr_4591 0.60 +0.1 5,451,815 + Psyr_4591 0.63 -0.0 5,451,815 + Psyr_4591 0.63 -1.0 5,451,815 + Psyr_4591 0.63 +1.0 5,451,816 - Psyr_4591 0.63 -1.4 5,451,848 - Psyr_4591 0.65 -1.5 5,451,848 - Psyr_4591 0.65 -0.4 5,451,848 - Psyr_4591 0.65 +1.5 5,451,848 - Psyr_4591 0.65 +1.0 5,452,036 + Psyr_4591 0.78 +1.4 5,452,177 + Psyr_4591 0.88 +1.4 5,452,178 - Psyr_4591 0.89 +0.9 5,452,213 - +0.6 5,452,213 - -0.6 5,452,333 + +0.6 5,452,333 + -1.0 5,452,333 + +3.4 5,452,333 + +0.6 5,452,333 + -1.2 5,452,333 + -0.4 5,452,333 + -1.1 5,452,333 + -0.6 5,452,333 + +0.9 5,452,334 - -0.3 5,452,334 - -1.0 5,452,334 - -0.3 5,452,334 - +0.3 5,452,334 - -0.4 5,452,334 - +0.2 5,452,334 - -0.5 5,452,334 - +0.2 5,452,334 - -0.4 5,452,538 - -1.1 5,452,762 + Psyr_4592 0.20 -0.1 5,452,762 + Psyr_4592 0.20 +1.5 5,452,762 + Psyr_4592 0.20 +0.1 5,452,763 - Psyr_4592 0.20 -1.4 5,453,113 + Psyr_4592 0.36 +0.0 5,453,113 + Psyr_4592 0.36 -0.0 5,453,114 - Psyr_4592 0.36 -0.6 5,453,114 - Psyr_4592 0.36 -1.9 5,453,114 - Psyr_4592 0.36 -0.2 5,453,114 - Psyr_4592 0.36 -0.1 5,453,114 - Psyr_4592 0.36 +0.4 5,453,114 - Psyr_4592 0.36 -0.4 5,453,168 + Psyr_4592 0.39 +2.0 5,453,169 - Psyr_4592 0.39 +0.4 5,453,169 - Psyr_4592 0.39 -1.4
Or see this region's nucleotide sequence