Experiment: KB with Anethole 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3600 and Psyr_3601 are separated by 138 nucleotides Psyr_3601 and Psyr_3602 overlap by 4 nucleotides
Psyr_3600: Psyr_3600 - transcriptional regulator, LysR family, at 4,281,346 to 4,282,314
_3600
Psyr_3601: Psyr_3601 - conserved hypothetical protein, at 4,282,453 to 4,283,064
_3601
Psyr_3602: Psyr_3602 - Rhodanese-like protein, at 4,283,061 to 4,284,644
_3602
Position (kb) 4282
4283
4284 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4281.672 kb on + strand, within Psyr_3600 at 4281.692 kb on + strand, within Psyr_3600 at 4281.796 kb on + strand, within Psyr_3600 at 4281.796 kb on + strand, within Psyr_3600 at 4282.058 kb on + strand, within Psyr_3600 at 4282.295 kb on + strand at 4282.296 kb on - strand at 4282.329 kb on + strand at 4282.329 kb on + strand at 4282.330 kb on - strand at 4282.372 kb on + strand at 4282.498 kb on - strand at 4282.969 kb on + strand, within Psyr_3601 at 4282.969 kb on + strand, within Psyr_3601 at 4282.969 kb on + strand, within Psyr_3601 at 4282.969 kb on + strand, within Psyr_3601 at 4282.970 kb on - strand, within Psyr_3601 at 4283.134 kb on + strand at 4283.316 kb on + strand, within Psyr_3602 at 4283.904 kb on + strand, within Psyr_3602 at 4283.904 kb on + strand, within Psyr_3602 at 4283.904 kb on + strand, within Psyr_3602 at 4283.904 kb on + strand, within Psyr_3602 at 4283.904 kb on + strand, within Psyr_3602 at 4283.904 kb on + strand, within Psyr_3602 at 4283.904 kb on + strand, within Psyr_3602 at 4283.904 kb on + strand, within Psyr_3602 at 4283.904 kb on + strand, within Psyr_3602 at 4283.905 kb on - strand, within Psyr_3602 at 4283.905 kb on - strand, within Psyr_3602 at 4283.905 kb on - strand, within Psyr_3602 at 4283.905 kb on - strand, within Psyr_3602 at 4283.905 kb on - strand, within Psyr_3602 at 4283.917 kb on + strand, within Psyr_3602 at 4283.917 kb on + strand, within Psyr_3602 at 4283.917 kb on + strand, within Psyr_3602 at 4283.917 kb on + strand, within Psyr_3602 at 4283.917 kb on + strand, within Psyr_3602 at 4283.918 kb on - strand, within Psyr_3602 at 4283.918 kb on - strand, within Psyr_3602 at 4283.918 kb on - strand, within Psyr_3602 at 4283.918 kb on - strand, within Psyr_3602
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Anethole 10 mM remove 4,281,672 + Psyr_3600 0.34 +2.0 4,281,692 + Psyr_3600 0.36 +1.5 4,281,796 + Psyr_3600 0.46 -0.2 4,281,796 + Psyr_3600 0.46 -0.1 4,282,058 + Psyr_3600 0.73 -0.0 4,282,295 + +0.2 4,282,296 - -0.1 4,282,329 + -1.5 4,282,329 + +0.1 4,282,330 - -0.3 4,282,372 + -0.8 4,282,498 - -1.7 4,282,969 + Psyr_3601 0.84 -2.9 4,282,969 + Psyr_3601 0.84 +0.6 4,282,969 + Psyr_3601 0.84 -1.4 4,282,969 + Psyr_3601 0.84 -0.1 4,282,970 - Psyr_3601 0.84 -0.7 4,283,134 + +1.7 4,283,316 + Psyr_3602 0.16 +0.1 4,283,904 + Psyr_3602 0.53 +2.6 4,283,904 + Psyr_3602 0.53 +0.6 4,283,904 + Psyr_3602 0.53 -2.9 4,283,904 + Psyr_3602 0.53 -0.4 4,283,904 + Psyr_3602 0.53 -0.0 4,283,904 + Psyr_3602 0.53 -0.3 4,283,904 + Psyr_3602 0.53 -0.4 4,283,904 + Psyr_3602 0.53 +1.6 4,283,904 + Psyr_3602 0.53 -1.0 4,283,905 - Psyr_3602 0.53 -0.6 4,283,905 - Psyr_3602 0.53 -0.7 4,283,905 - Psyr_3602 0.53 -0.3 4,283,905 - Psyr_3602 0.53 -0.4 4,283,905 - Psyr_3602 0.53 +0.2 4,283,917 + Psyr_3602 0.54 +0.1 4,283,917 + Psyr_3602 0.54 +2.6 4,283,917 + Psyr_3602 0.54 -0.3 4,283,917 + Psyr_3602 0.54 -1.2 4,283,917 + Psyr_3602 0.54 -1.4 4,283,918 - Psyr_3602 0.54 +1.0 4,283,918 - Psyr_3602 0.54 -0.2 4,283,918 - Psyr_3602 0.54 +0.5 4,283,918 - Psyr_3602 0.54 -0.2
Or see this region's nucleotide sequence