Experiment: KB with Auraptene 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4349 and Psyr_4350 are separated by 66 nucleotides Psyr_4350 and Psyr_4351 are separated by 120 nucleotides Psyr_4351 and Psyr_4352 are separated by 314 nucleotides
Psyr_4349: Psyr_4349 - Apolipoprotein N-acyltransferase, at 5,202,195 to 5,203,715
_4349
Psyr_4350: Psyr_4350 - Protein of unknown function DUF218, at 5,203,782 to 5,204,552
_4350
Psyr_4351: Psyr_4351 - conserved domain protein, at 5,204,673 to 5,205,014
_4351
Psyr_4352: Psyr_4352 - leucyl-tRNA synthetase, at 5,205,329 to 5,207,935
_4352
Position (kb) 5204
5205
5206 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5203.811 kb on - strand at 5203.811 kb on - strand at 5203.811 kb on - strand at 5204.015 kb on + strand, within Psyr_4350 at 5204.015 kb on + strand, within Psyr_4350 at 5204.182 kb on - strand, within Psyr_4350 at 5204.373 kb on - strand, within Psyr_4350 at 5204.540 kb on - strand at 5204.582 kb on - strand at 5204.674 kb on + strand at 5204.674 kb on + strand at 5204.675 kb on - strand at 5204.675 kb on - strand at 5204.675 kb on - strand at 5204.675 kb on - strand at 5204.927 kb on + strand, within Psyr_4351 at 5204.985 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.992 kb on - strand at 5204.992 kb on - strand at 5204.992 kb on - strand at 5205.034 kb on + strand at 5205.034 kb on + strand at 5205.034 kb on + strand at 5205.035 kb on - strand at 5205.089 kb on + strand at 5205.089 kb on + strand at 5205.106 kb on + strand at 5205.107 kb on - strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.197 kb on + strand at 5205.307 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Auraptene 10 mM remove 5,203,811 - +1.1 5,203,811 - -1.2 5,203,811 - -0.8 5,204,015 + Psyr_4350 0.30 -0.6 5,204,015 + Psyr_4350 0.30 +0.9 5,204,182 - Psyr_4350 0.52 -1.0 5,204,373 - Psyr_4350 0.77 -2.1 5,204,540 - +0.3 5,204,582 - +1.0 5,204,674 + -1.3 5,204,674 + +0.8 5,204,675 - +0.6 5,204,675 - +0.8 5,204,675 - +0.1 5,204,675 - -0.0 5,204,927 + Psyr_4351 0.74 +0.7 5,204,985 + +0.7 5,204,991 + +4.4 5,204,991 + -0.1 5,204,991 + +0.3 5,204,991 + -1.5 5,204,991 + -0.9 5,204,991 + +1.0 5,204,992 - -0.7 5,204,992 - -0.7 5,204,992 - -0.7 5,205,034 + -0.5 5,205,034 + -0.1 5,205,034 + +2.9 5,205,035 - -0.9 5,205,089 + +1.7 5,205,089 + +0.3 5,205,106 + +0.2 5,205,107 - +0.7 5,205,178 + +0.4 5,205,178 + -0.2 5,205,178 + -1.3 5,205,178 + -0.3 5,205,178 + +1.7 5,205,178 + -1.1 5,205,178 + +0.4 5,205,178 + -0.6 5,205,178 + -0.2 5,205,178 + +2.7 5,205,178 + +0.6 5,205,178 + +1.1 5,205,178 + +0.2 5,205,178 + +1.1 5,205,178 + -0.6 5,205,178 + -0.5 5,205,178 + +0.4 5,205,178 + -0.2 5,205,178 + -1.9 5,205,178 + -0.4 5,205,178 + -1.0 5,205,178 + -0.6 5,205,178 + -1.1 5,205,178 + -2.1 5,205,178 + -0.2 5,205,178 + +0.8 5,205,178 + +1.5 5,205,178 + -0.6 5,205,178 + +1.7 5,205,178 + +2.7 5,205,178 + -0.7 5,205,178 + -0.5 5,205,178 + +0.7 5,205,197 + +0.8 5,205,307 + -2.7
Or see this region's nucleotide sequence