Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4403 and Psyr_4404 are separated by 316 nucleotides Psyr_4404 and Psyr_4405 overlap by 4 nucleotides Psyr_4405 and Psyr_4406 are separated by 68 nucleotides
Psyr_4403: Psyr_4403 - conserved hypothetical protein, at 5,264,668 to 5,265,990
_4403
Psyr_4404: Psyr_4404 - tRNA-U20-dihydrouridine synthase, at 5,266,307 to 5,267,320
_4404
Psyr_4405: Psyr_4405 - DNA-binding protein Fis, at 5,267,317 to 5,267,637
_4405
Psyr_4406: Psyr_4406 - IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase, at 5,267,706 to 5,269,322
_4406
Position (kb) 5266
5267
5268 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5265.479 kb on + strand, within Psyr_4403 at 5265.480 kb on - strand, within Psyr_4403 at 5265.546 kb on - strand, within Psyr_4403 at 5265.574 kb on + strand, within Psyr_4403 at 5265.574 kb on + strand, within Psyr_4403 at 5265.574 kb on + strand, within Psyr_4403 at 5265.574 kb on + strand, within Psyr_4403 at 5265.574 kb on + strand, within Psyr_4403 at 5265.574 kb on + strand, within Psyr_4403 at 5265.574 kb on + strand, within Psyr_4403 at 5265.575 kb on - strand, within Psyr_4403 at 5265.575 kb on - strand, within Psyr_4403 at 5265.575 kb on - strand, within Psyr_4403 at 5265.575 kb on - strand, within Psyr_4403 at 5265.575 kb on - strand, within Psyr_4403 at 5265.575 kb on - strand, within Psyr_4403 at 5265.760 kb on + strand, within Psyr_4403 at 5265.760 kb on + strand, within Psyr_4403 at 5265.760 kb on + strand, within Psyr_4403 at 5265.761 kb on - strand, within Psyr_4403 at 5265.761 kb on - strand, within Psyr_4403 at 5265.761 kb on - strand, within Psyr_4403 at 5265.761 kb on - strand, within Psyr_4403 at 5265.863 kb on - strand at 5265.962 kb on - strand at 5265.962 kb on - strand at 5265.962 kb on - strand at 5266.148 kb on + strand at 5266.300 kb on + strand at 5266.331 kb on + strand at 5266.331 kb on + strand at 5266.331 kb on + strand at 5266.331 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.333 kb on + strand at 5266.716 kb on + strand, within Psyr_4404 at 5266.716 kb on + strand, within Psyr_4404 at 5266.844 kb on + strand, within Psyr_4404 at 5266.862 kb on + strand, within Psyr_4404 at 5267.025 kb on + strand, within Psyr_4404 at 5267.025 kb on + strand, within Psyr_4404 at 5267.025 kb on + strand, within Psyr_4404 at 5267.025 kb on + strand, within Psyr_4404 at 5267.025 kb on + strand, within Psyr_4404 at 5267.025 kb on + strand, within Psyr_4404 at 5267.123 kb on + strand, within Psyr_4404 at 5267.635 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 5,265,479 + Psyr_4403 0.61 +1.4 5,265,480 - Psyr_4403 0.61 -1.0 5,265,546 - Psyr_4403 0.66 +1.0 5,265,574 + Psyr_4403 0.68 -0.7 5,265,574 + Psyr_4403 0.68 -0.8 5,265,574 + Psyr_4403 0.68 +0.2 5,265,574 + Psyr_4403 0.68 -0.7 5,265,574 + Psyr_4403 0.68 +2.4 5,265,574 + Psyr_4403 0.68 +0.2 5,265,574 + Psyr_4403 0.68 -1.9 5,265,575 - Psyr_4403 0.69 +0.1 5,265,575 - Psyr_4403 0.69 +0.0 5,265,575 - Psyr_4403 0.69 -0.0 5,265,575 - Psyr_4403 0.69 -0.5 5,265,575 - Psyr_4403 0.69 -1.4 5,265,575 - Psyr_4403 0.69 +0.4 5,265,760 + Psyr_4403 0.83 -0.3 5,265,760 + Psyr_4403 0.83 -0.6 5,265,760 + Psyr_4403 0.83 +0.1 5,265,761 - Psyr_4403 0.83 -0.4 5,265,761 - Psyr_4403 0.83 -0.8 5,265,761 - Psyr_4403 0.83 -0.7 5,265,761 - Psyr_4403 0.83 -0.5 5,265,863 - +1.7 5,265,962 - +1.7 5,265,962 - -1.0 5,265,962 - +0.3 5,266,148 + +0.4 5,266,300 + -0.7 5,266,331 + -0.5 5,266,331 + -0.3 5,266,331 + -0.1 5,266,331 + -1.0 5,266,333 + -1.2 5,266,333 + -0.2 5,266,333 + -2.5 5,266,333 + +1.2 5,266,333 + +0.5 5,266,333 + -0.6 5,266,333 + +0.9 5,266,333 + -0.6 5,266,333 + -0.4 5,266,333 + +0.3 5,266,333 + +0.4 5,266,333 + +0.9 5,266,333 + -0.3 5,266,333 + -0.7 5,266,333 + +2.0 5,266,333 + -1.1 5,266,333 + +0.8 5,266,333 + +0.1 5,266,333 + -1.1 5,266,333 + -0.3 5,266,333 + +0.8 5,266,333 + +0.8 5,266,333 + -0.2 5,266,333 + -0.1 5,266,333 + -0.5 5,266,333 + +0.2 5,266,333 + -0.4 5,266,716 + Psyr_4404 0.40 -0.9 5,266,716 + Psyr_4404 0.40 -0.0 5,266,844 + Psyr_4404 0.53 +0.0 5,266,862 + Psyr_4404 0.55 -1.2 5,267,025 + Psyr_4404 0.71 -0.2 5,267,025 + Psyr_4404 0.71 +0.7 5,267,025 + Psyr_4404 0.71 -1.2 5,267,025 + Psyr_4404 0.71 -1.2 5,267,025 + Psyr_4404 0.71 -0.4 5,267,025 + Psyr_4404 0.71 -1.5 5,267,123 + Psyr_4404 0.80 -1.3 5,267,635 + +1.2
Or see this region's nucleotide sequence