Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2428

Experiment: KB with Dimethyl Sulfoxide 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Dimethyl Sulfoxide 1.25 vol%
2,808,901	+				-1.0
2,808,901	+				-2.0
2,808,902	-				+1.6
2,808,904	+				+1.0
2,808,904	+				-0.7
2,808,905	-				+1.3
2,808,985	+				+0.6
2,808,986	-				-0.2
2,809,082	+				-1.0
2,809,327	+				-0.4
2,809,337	+				-1.1
2,809,338	-				-2.0
2,809,338	-				+1.4
2,809,364	-				+0.0
2,809,366	+				-1.4
2,809,367	-				-1.0
2,809,417	+				-0.1
2,809,427	+				+1.2
2,809,429	+				+0.4
2,809,430	-				+0.4
2,809,430	-				+0.9
2,809,430	-				+0.0
2,809,447	+				-0.7
2,809,448	-				-0.6
2,809,448	-				-1.5
2,809,448	-				-0.0
2,809,470	-				+0.4
2,809,470	-				+0.9
2,809,481	+				-0.5
2,809,493	-				-0.6
2,809,520	+				+1.3
2,809,520	+				+0.5
2,809,526	+				+3.2
2,809,548	-				-0.3
2,809,550	+				+0.7
2,809,551	-				+0.3
2,809,551	-				+0.7
2,809,551	-				+0.3
2,809,556	+				-1.5
2,809,556	+				+0.0
2,809,557	-				-0.2
2,809,565	+				-1.1
2,809,566	-				-0.7
2,809,597	+				+3.3
2,809,598	-				-0.7
2,809,598	-				+2.0
2,809,614	+				+1.7
2,809,647	-				-2.1
2,809,683	+				+0.7
2,809,684	-				+0.4
2,809,684	-				-0.7
2,809,684	-				-0.4
2,809,686	+				+1.3
2,809,686	+				+2.1
2,809,686	+				-1.7
2,809,686	+				-1.5
2,809,687	-				-0.6
2,809,690	-				+0.2
2,809,699	-				-3.7
2,809,712	+				+1.3
2,809,870	-				+0.4
2,809,918	+		Psyr_2428	0.14	-0.2
2,809,919	-		Psyr_2428	0.14	+0.3
2,810,028	+		Psyr_2428	0.37	-0.2
2,810,058	-		Psyr_2428	0.44	-1.6
2,810,076	+		Psyr_2428	0.47	-3.2
2,810,100	-		Psyr_2428	0.52	+0.2
2,810,100	-		Psyr_2428	0.52	+1.3
2,810,132	-		Psyr_2428	0.59	-0.8
2,810,151	-		Psyr_2428	0.63	-0.7
2,810,153	+		Psyr_2428	0.64	+0.6
2,810,154	-		Psyr_2428	0.64	-0.8
2,810,320	+				-0.3
2,810,373	+				+2.9
2,810,373	+				-1.6
2,810,374	-				-0.4
2,810,416	+				+0.2
2,810,485	-				-0.7
2,810,491	-				+1.0
2,810,647	+				+0.3
2,810,654	+				+0.3
2,810,654	+				+0.0
2,810,655	-				-1.1
2,810,655	-				-0.6
2,810,713	-				+0.7
2,810,722	-				-2.7
2,810,722	-				-1.4
2,810,725	+				+0.8
2,810,726	-				-1.4
2,810,837	-				-1.2
2,810,837	-				-0.9
2,811,060	+				+0.8
2,811,061	-				+1.7