Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1158

Experiment: KB with Dimethyl Sulfoxide 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Dimethyl Sulfoxide 1.25 vol%
1,309,331	+		Psyr_1157	0.47	-0.7
1,309,331	+		Psyr_1157	0.47	+1.7
1,309,331	+		Psyr_1157	0.47	-1.2
1,309,332	-		Psyr_1157	0.47	+1.4
1,309,415	+		Psyr_1157	0.54	-0.3
1,309,416	-		Psyr_1157	0.54	-0.9
1,309,416	-		Psyr_1157	0.54	+1.8
1,309,416	-		Psyr_1157	0.54	-1.1
1,309,416	-		Psyr_1157	0.54	+0.5
1,309,652	-		Psyr_1157	0.73	-0.8
1,309,700	+		Psyr_1157	0.76	+2.3
1,309,700	+		Psyr_1157	0.76	+1.3
1,309,700	+		Psyr_1157	0.76	-0.3
1,309,700	+		Psyr_1157	0.76	-0.6
1,309,701	-		Psyr_1157	0.77	+1.3
1,309,701	-		Psyr_1157	0.77	+2.3
1,309,701	-		Psyr_1157	0.77	-0.5
1,309,701	-		Psyr_1157	0.77	-2.0
1,309,850	+		Psyr_1157	0.88	-0.6
1,309,883	+				+2.3
1,309,883	+				-1.4
1,309,883	+				-0.6
1,309,883	+				+0.8
1,309,884	-				-1.1
1,309,884	-				+0.3
1,309,884	-				-0.2
1,310,020	+				-0.3
1,310,044	+				-3.2
1,310,045	-				+1.3
1,310,045	-				+0.1
1,310,123	+				+0.9
1,310,123	+				-0.3
1,310,123	+				-0.3
1,310,124	-				-0.8
1,310,124	-				+0.9
1,310,124	-				-0.9
1,310,124	-				-0.8
1,310,125	+				+1.1
1,310,125	+				-1.3
1,310,125	+				-0.1
1,310,125	+				-0.3
1,310,125	+				-0.4
1,310,126	-				-0.1
1,310,126	-				-1.8
1,310,126	-				+0.1
1,310,126	-				+1.1
1,310,173	+				-0.9
1,310,173	+				-0.6
1,310,174	-				-0.9
1,310,174	-				-0.3
1,310,174	-				+2.8
1,310,193	+				+0.1
1,310,193	+				+0.7
1,310,193	+				+1.0
1,310,194	-				-0.2
1,310,194	-				-0.7
1,310,194	-				+0.1
1,310,244	+				+0.3
1,310,244	+				+1.3
1,310,245	-				+2.3
1,310,362	+				+0.3
1,311,094	-		Psyr_1158	0.57	-0.5
1,311,232	+		Psyr_1158	0.67	+0.1
1,311,233	-		Psyr_1158	0.67	+1.0
1,311,368	+		Psyr_1158	0.77	-0.1
1,311,369	-		Psyr_1158	0.77	-0.3
1,311,696	-				-0.7
1,311,769	+				-1.8
1,311,770	-				+0.4
1,311,770	-				-2.1
1,311,770	-				-1.1
1,311,810	+				-0.0
1,311,852	+				-0.4
1,311,852	+				+1.3
1,311,852	+				-1.7
1,311,852	+				+0.8
1,311,852	+				+0.1
1,311,853	-				+2.3
1,311,853	-				+1.3
1,311,853	-				+0.8
1,311,853	-				+0.4
1,311,853	-				-0.0
1,311,853	-				+0.2
1,311,853	-				-1.6
1,311,948	+				+0.5
1,311,948	+				+0.6
1,311,948	+				+1.5
1,311,948	+				+1.3
1,311,948	+				-0.5
1,311,948	+				+2.3
1,311,948	+				-1.1
1,311,948	+				-0.6
1,311,948	+				+0.4
1,311,948	+				-0.2
1,311,948	+				-1.4
1,311,949	-				-1.0
1,311,949	-				-0.6
1,311,949	-				-0.2
1,311,949	-				-1.2
1,311,949	-				+0.1
1,311,949	-				-0.5
1,312,153	+		Psyr_1159	0.19	-0.7
1,312,154	-		Psyr_1159	0.19	-2.8
1,312,154	-		Psyr_1159	0.19	-1.1
1,312,154	-		Psyr_1159	0.19	+1.3
1,312,330	+		Psyr_1159	0.26	-0.1
1,312,330	+		Psyr_1159	0.26	-1.1
1,312,459	-		Psyr_1159	0.32	+4.1
1,312,590	+		Psyr_1159	0.38	-1.1
1,312,590	+		Psyr_1159	0.38	-0.0
1,312,590	+		Psyr_1159	0.38	+0.4
1,312,590	+		Psyr_1159	0.38	-1.3
1,312,590	+		Psyr_1159	0.38	-1.8
1,312,591	-		Psyr_1159	0.38	-0.2
1,312,591	-		Psyr_1159	0.38	+0.5
1,312,591	-		Psyr_1159	0.38	-2.9
1,312,591	-		Psyr_1159	0.38	-0.9
1,312,591	-		Psyr_1159	0.38	-0.7
1,312,634	-		Psyr_1159	0.40	-1.9