Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_4607

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsyr_4606 and Psyr_4607 are separated by 937 nucleotidesPsyr_4607 and Psyr_4608 are separated by 59 nucleotides Psyr_4606: Psyr_4606 - Outer membrane autotransporter barrel, at 5,462,253 to 5,464,175 _4606 Psyr_4607: Psyr_4607 - Helix-turn-helix, Fis-type, at 5,465,113 to 5,465,412 _4607 Psyr_4608: Psyr_4608 - Integrase, catalytic region, at 5,465,472 to 5,466,254 _4608 Position (kb) 5465 5466Strain fitness (log2 ratio) -1 0 1 2at 5464.173 kb on + strandat 5465.011 kb on + strandat 5465.011 kb on + strandat 5465.023 kb on + strandat 5466.252 kb on + strandat 5466.259 kb on + strandat 5466.259 kb on + strandat 5466.259 kb on + strandat 5466.259 kb on + strandat 5466.261 kb on + strandat 5466.261 kb on + strandat 5466.261 kb on + strandat 5466.261 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction KB
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5,464,173 + +0.7
5,465,011 + -0.2
5,465,011 + -0.0
5,465,023 + +0.8
5,466,252 + -1.0
5,466,259 + +0.8
5,466,259 + +0.3
5,466,259 + -0.9
5,466,259 + +0.3
5,466,261 + +0.2
5,466,261 + +1.6
5,466,261 + +2.5
5,466,261 + +0.6

Or see this region's nucleotide sequence