Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3901 and Psyr_3902 overlap by 4 nucleotides Psyr_3902 and Psyr_3903 are separated by 8 nucleotides Psyr_3903 and Psyr_3904 are separated by 341 nucleotides
Psyr_3901: Psyr_3901 - ornithine carbamoyltransferase, at 4,642,209 to 4,643,129
_3901
Psyr_3902: Psyr_3902 - ABC transporter:TOBE, at 4,643,126 to 4,644,199
_3902
Psyr_3903: Psyr_3903 - Conserved hypothetical protein 11, at 4,644,208 to 4,644,678
_3903
Psyr_3904: Psyr_3904 - Major intrinsic protein, at 4,645,020 to 4,645,877
_3904
Position (kb) 4643
4644
4645 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4642.174 kb on + strand at 4642.200 kb on + strand at 4643.394 kb on - strand, within Psyr_3902 at 4643.401 kb on - strand, within Psyr_3902 at 4643.786 kb on + strand, within Psyr_3902 at 4643.843 kb on + strand, within Psyr_3902 at 4643.843 kb on + strand, within Psyr_3902 at 4643.844 kb on - strand, within Psyr_3902 at 4643.844 kb on - strand, within Psyr_3902 at 4643.844 kb on - strand, within Psyr_3902 at 4643.844 kb on - strand, within Psyr_3902 at 4643.844 kb on - strand, within Psyr_3902 at 4643.898 kb on + strand, within Psyr_3902 at 4643.918 kb on + strand, within Psyr_3902 at 4643.955 kb on + strand, within Psyr_3902 at 4643.955 kb on + strand, within Psyr_3902 at 4643.955 kb on + strand, within Psyr_3902 at 4644.041 kb on + strand, within Psyr_3902 at 4644.042 kb on - strand, within Psyr_3902 at 4644.194 kb on - strand at 4644.244 kb on - strand at 4644.305 kb on + strand, within Psyr_3903 at 4644.305 kb on + strand, within Psyr_3903 at 4644.305 kb on + strand, within Psyr_3903 at 4644.305 kb on + strand, within Psyr_3903 at 4644.305 kb on + strand, within Psyr_3903 at 4644.469 kb on + strand, within Psyr_3903 at 4644.470 kb on - strand, within Psyr_3903 at 4644.470 kb on - strand, within Psyr_3903 at 4644.470 kb on - strand, within Psyr_3903 at 4644.470 kb on - strand, within Psyr_3903 at 4644.470 kb on - strand, within Psyr_3903 at 4644.509 kb on - strand, within Psyr_3903 at 4644.509 kb on - strand, within Psyr_3903 at 4644.620 kb on + strand, within Psyr_3903 at 4644.620 kb on + strand, within Psyr_3903 at 4644.621 kb on - strand, within Psyr_3903 at 4644.621 kb on - strand, within Psyr_3903 at 4644.723 kb on + strand at 4644.797 kb on + strand at 4644.797 kb on + strand at 4644.797 kb on + strand at 4644.798 kb on - strand at 4644.915 kb on + strand at 4644.915 kb on + strand at 4644.915 kb on + strand at 4644.915 kb on + strand at 4644.915 kb on + strand at 4644.916 kb on - strand at 4644.916 kb on - strand at 4645.015 kb on + strand at 4645.033 kb on + strand at 4645.197 kb on + strand, within Psyr_3904 at 4645.197 kb on + strand, within Psyr_3904 at 4645.197 kb on + strand, within Psyr_3904
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 4,642,174 + -0.1 4,642,200 + -0.5 4,643,394 - Psyr_3902 0.25 +0.3 4,643,401 - Psyr_3902 0.26 -0.3 4,643,786 + Psyr_3902 0.61 +1.1 4,643,843 + Psyr_3902 0.67 -1.2 4,643,843 + Psyr_3902 0.67 +1.4 4,643,844 - Psyr_3902 0.67 -0.2 4,643,844 - Psyr_3902 0.67 -1.0 4,643,844 - Psyr_3902 0.67 +1.4 4,643,844 - Psyr_3902 0.67 +3.4 4,643,844 - Psyr_3902 0.67 +0.9 4,643,898 + Psyr_3902 0.72 +1.0 4,643,918 + Psyr_3902 0.74 +3.7 4,643,955 + Psyr_3902 0.77 -0.3 4,643,955 + Psyr_3902 0.77 +0.8 4,643,955 + Psyr_3902 0.77 +1.5 4,644,041 + Psyr_3902 0.85 -0.0 4,644,042 - Psyr_3902 0.85 +0.4 4,644,194 - -1.1 4,644,244 - +0.7 4,644,305 + Psyr_3903 0.21 -0.9 4,644,305 + Psyr_3903 0.21 -0.7 4,644,305 + Psyr_3903 0.21 -1.6 4,644,305 + Psyr_3903 0.21 +0.5 4,644,305 + Psyr_3903 0.21 -1.7 4,644,469 + Psyr_3903 0.55 +1.7 4,644,470 - Psyr_3903 0.56 -1.8 4,644,470 - Psyr_3903 0.56 -1.6 4,644,470 - Psyr_3903 0.56 +1.5 4,644,470 - Psyr_3903 0.56 +0.1 4,644,470 - Psyr_3903 0.56 -0.4 4,644,509 - Psyr_3903 0.64 -1.9 4,644,509 - Psyr_3903 0.64 -1.7 4,644,620 + Psyr_3903 0.87 -2.1 4,644,620 + Psyr_3903 0.87 -1.2 4,644,621 - Psyr_3903 0.88 -1.1 4,644,621 - Psyr_3903 0.88 +0.4 4,644,723 + +0.5 4,644,797 + +1.2 4,644,797 + -0.0 4,644,797 + -0.5 4,644,798 - -0.1 4,644,915 + -1.3 4,644,915 + +1.1 4,644,915 + -0.9 4,644,915 + -2.5 4,644,915 + -0.3 4,644,916 - -2.9 4,644,916 - -2.2 4,645,015 + -2.4 4,645,033 + -1.7 4,645,197 + Psyr_3904 0.21 -1.6 4,645,197 + Psyr_3904 0.21 -0.5 4,645,197 + Psyr_3904 0.21 -1.3
Or see this region's nucleotide sequence