Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3863

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
4,601,231	-				+1.2
4,601,475	+		Psyr_3861	0.89	-1.0
4,601,476	-		Psyr_3861	0.89	+1.4
4,601,476	-		Psyr_3861	0.89	-0.7
4,601,574	+				+1.3
4,601,575	-				-1.3
4,601,575	-				-0.5
4,601,595	-				+1.9
4,601,626	+				-0.5
4,601,626	+				-3.0
4,601,626	+				+0.5
4,601,626	+				-0.1
4,601,626	+				-1.2
4,601,627	-				-0.3
4,601,627	-				+3.1
4,601,627	-				+0.4
4,601,627	-				-0.2
4,601,627	-				+2.7
4,601,627	-				-0.3
4,601,627	-				+0.6
4,601,627	-				+1.7
4,601,627	-				+0.1
4,601,627	-				-0.6
4,601,627	-				-0.2
4,601,627	-				-1.3
4,601,627	-				+1.1
4,601,695	+				+1.0
4,602,129	+		Psyr_3862	0.81	-0.2
4,602,130	-		Psyr_3862	0.81	-2.2
4,602,130	-		Psyr_3862	0.81	+0.9
4,602,148	+		Psyr_3862	0.85	+3.4
4,602,148	+		Psyr_3862	0.85	+0.2
4,602,148	+		Psyr_3862	0.85	+1.1
4,602,149	-		Psyr_3862	0.85	-1.0
4,602,181	+				+0.2
4,602,181	+				-0.1
4,602,182	-				-0.5
4,602,182	-				+1.1
4,602,211	+				+0.0
4,602,212	-				+0.6
4,602,225	+				-0.1
4,602,225	+				+0.1
4,602,225	+				+0.7
4,602,226	-				+0.5
4,602,226	-				-0.7
4,602,226	-				-0.4
4,602,232	-				-0.4
4,602,337	+		Psyr_3863	0.23	+0.1
4,602,347	-		Psyr_3863	0.26	-0.5
4,602,347	-		Psyr_3863	0.26	-2.5
4,602,347	-		Psyr_3863	0.26	-0.4
4,602,347	-		Psyr_3863	0.26	+2.1
4,602,347	-		Psyr_3863	0.26	+0.5
4,602,347	-		Psyr_3863	0.26	+0.2
4,602,367	+		Psyr_3863	0.30	+0.5
4,602,368	-		Psyr_3863	0.30	+1.2
4,602,381	+		Psyr_3863	0.33	+0.2
4,602,382	-		Psyr_3863	0.33	+0.5
4,602,382	-		Psyr_3863	0.33	-1.4
4,602,465	-		Psyr_3863	0.50	+0.2
4,602,465	-		Psyr_3863	0.50	+2.1
4,602,688	+				-0.5
4,602,743	-				-1.6
4,602,975	-				+1.6
4,603,155	+				+1.1
4,603,155	+				+1.1
4,603,155	+				+0.4
4,603,155	+				+2.1
4,603,155	+				+0.1
4,603,155	+				-1.4
4,603,155	+				+0.8
4,603,155	+				+1.1
4,603,155	+				-0.8
4,603,155	+				-1.2
4,603,316	-				+0.2
4,603,316	-				-0.4
4,603,363	+				+0.8
4,603,363	+				+1.1
4,603,513	+				-1.1
4,603,513	+				+1.2
4,603,513	+				+2.1
4,603,513	+				-1.3
4,603,514	-				+0.1
4,603,514	-				+0.3
4,603,528	+				-1.0
4,603,528	+				-0.1
4,603,529	-				-0.1
4,603,560	+		Psyr_3864	0.10	+1.1
4,603,577	-		Psyr_3864	0.11	+0.0
4,603,585	+		Psyr_3864	0.11	-0.5
4,603,585	+		Psyr_3864	0.11	+1.2
4,603,677	-		Psyr_3864	0.15	+0.1
4,603,677	-		Psyr_3864	0.15	-0.3