Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2309

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
2,683,153	+				+1.5
2,683,245	-		Psyr_2307	0.45	+0.4
2,683,245	-		Psyr_2307	0.45	-0.8
2,683,296	+		Psyr_2307	0.68	+0.9
2,683,307	+		Psyr_2307	0.73	+0.6
2,683,307	+		Psyr_2307	0.73	+0.8
2,683,307	+		Psyr_2307	0.73	+0.1
2,683,308	-		Psyr_2307	0.74	+0.4
2,683,355	-				+0.5
2,683,356	+				-1.1
2,683,356	+				+0.2
2,683,357	-				+0.4
2,683,357	-				-1.9
2,683,357	-				-0.0
2,683,376	+				+0.8
2,683,392	+				-3.0
2,683,392	+				-0.3
2,683,396	-				+0.2
2,683,457	+				-0.1
2,683,457	+				+0.5
2,683,458	-				+0.1
2,683,458	-				-0.7
2,683,458	-				+0.5
2,683,458	-				-2.7
2,683,693	-				-0.2
2,683,693	-				+0.9
2,683,693	-				+0.0
2,683,693	-				+0.4
2,683,917	-		Psyr_2309	0.29	+0.1
2,683,917	-		Psyr_2309	0.29	-0.1
2,683,928	+		Psyr_2309	0.31	-0.5
2,683,928	+		Psyr_2309	0.31	-0.7
2,683,928	+		Psyr_2309	0.31	-0.6
2,683,929	-		Psyr_2309	0.31	-0.5
2,683,929	-		Psyr_2309	0.31	+0.0
2,683,929	-		Psyr_2309	0.31	+1.2
2,683,929	-		Psyr_2309	0.31	+1.2
2,684,103	-		Psyr_2309	0.63	-0.5
2,684,113	-		Psyr_2309	0.65	-1.5
2,684,150	+		Psyr_2309	0.71	-1.3
2,684,150	+		Psyr_2309	0.71	+0.6
2,684,150	+		Psyr_2309	0.71	-0.6
2,684,150	+		Psyr_2309	0.71	-1.6
2,684,284	+				-0.5
2,684,284	+				+1.0
2,684,285	-				-0.7
2,684,308	+				+0.6
2,684,366	+				-0.7
2,684,417	-				-0.3
2,684,597	+				-1.1
2,684,654	+		Psyr_2310	0.19	-0.2
2,684,655	-		Psyr_2310	0.19	-0.1
2,684,655	-		Psyr_2310	0.19	+0.3
2,684,655	-		Psyr_2310	0.19	-1.0
2,684,748	-		Psyr_2310	0.49	+0.6
2,684,770	+		Psyr_2310	0.56	+0.3
2,684,770	+		Psyr_2310	0.56	-0.8
2,684,770	+		Psyr_2310	0.56	-1.0
2,684,899	-				+0.2
2,684,927	-				-1.1
2,684,929	-				+3.4
2,684,951	+				-1.3
2,684,951	+				-0.9
2,684,952	-				-0.1
2,684,955	-				-0.7
2,685,202	-		Psyr_2311	0.23	-0.5
2,685,202	-		Psyr_2311	0.23	-0.6
2,685,202	-		Psyr_2311	0.23	-0.7
2,685,259	-		Psyr_2311	0.30	-1.3
2,685,283	-		Psyr_2311	0.33	+0.4