Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3479

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
4,149,996	-		Psyr_3478	0.27	+0.0
4,150,044	+		Psyr_3478	0.31	+0.1
4,150,104	+		Psyr_3478	0.35	-0.0
4,150,104	+		Psyr_3478	0.35	+2.5
4,150,105	-		Psyr_3478	0.35	+0.3
4,150,162	-		Psyr_3478	0.40	-0.5
4,150,162	-		Psyr_3478	0.40	+0.9
4,150,197	+		Psyr_3478	0.42	+1.5
4,150,254	+		Psyr_3478	0.47	+1.4
4,150,313	+		Psyr_3478	0.51	+0.3
4,150,313	+		Psyr_3478	0.51	+0.3
4,150,314	-		Psyr_3478	0.51	+0.6
4,150,314	-		Psyr_3478	0.51	-0.2
4,150,327	-		Psyr_3478	0.52	-0.1
4,150,349	+		Psyr_3478	0.54	-1.9
4,150,400	+		Psyr_3478	0.58	-0.2
4,150,400	+		Psyr_3478	0.58	+1.2
4,150,400	+		Psyr_3478	0.58	+2.0
4,150,400	+		Psyr_3478	0.58	-0.7
4,150,400	+		Psyr_3478	0.58	-0.7
4,150,401	-		Psyr_3478	0.58	-0.9
4,150,401	-		Psyr_3478	0.58	-1.2
4,150,412	+		Psyr_3478	0.59	+0.6
4,150,412	+		Psyr_3478	0.59	+0.5
4,150,412	+		Psyr_3478	0.59	+0.0
4,150,412	+		Psyr_3478	0.59	-2.9
4,150,412	+		Psyr_3478	0.59	-0.8
4,150,412	+		Psyr_3478	0.59	-0.3
4,150,412	+		Psyr_3478	0.59	-0.9
4,150,412	+		Psyr_3478	0.59	-0.0
4,150,412	+		Psyr_3478	0.59	+0.3
4,150,412	+		Psyr_3478	0.59	-2.2
4,150,413	-		Psyr_3478	0.59	+0.0
4,150,413	-		Psyr_3478	0.59	+0.3
4,150,413	-		Psyr_3478	0.59	-1.8
4,150,413	-		Psyr_3478	0.59	-0.8
4,150,413	-		Psyr_3478	0.59	-0.4
4,150,413	-		Psyr_3478	0.59	-0.7
4,150,416	+		Psyr_3478	0.59	+1.5
4,150,609	-		Psyr_3478	0.73	-0.8
4,150,619	+		Psyr_3478	0.74	+0.1
4,150,619	+		Psyr_3478	0.74	+1.4
4,150,619	+		Psyr_3478	0.74	-1.4
4,150,620	-		Psyr_3478	0.74	-0.5
4,150,658	+		Psyr_3478	0.77	+2.1
4,150,658	+		Psyr_3478	0.77	-0.4
4,150,659	-		Psyr_3478	0.77	+0.5
4,150,659	-		Psyr_3478	0.77	-2.6
4,150,803	+		Psyr_3478	0.88	-1.8
4,150,816	-		Psyr_3478	0.89	-0.6
4,150,835	+				+0.6
4,150,835	+				-0.3
4,150,931	+				-0.5
4,150,931	+				+1.6
4,150,931	+				+0.3
4,150,931	+				-0.3
4,150,931	+				+0.0
4,150,931	+				+2.9
4,150,932	-				-0.7
4,150,932	-				+0.8
4,150,941	+				-0.0
4,150,990	-				-0.1
4,151,100	+		Psyr_3479	0.16	+0.5
4,151,101	-		Psyr_3479	0.16	-1.3
4,151,101	-		Psyr_3479	0.16	-0.6
4,151,101	-		Psyr_3479	0.16	-0.6
4,151,154	+		Psyr_3479	0.24	-1.7
4,151,154	+		Psyr_3479	0.24	-0.4
4,151,155	-		Psyr_3479	0.24	-0.5
4,151,155	-		Psyr_3479	0.24	-0.3
4,151,155	-		Psyr_3479	0.24	-0.1
4,151,272	-		Psyr_3479	0.41	-0.3
4,151,418	+		Psyr_3479	0.62	+0.3
4,151,418	+		Psyr_3479	0.62	+0.3
4,151,418	+		Psyr_3479	0.62	-0.9
4,151,418	+		Psyr_3479	0.62	-0.9
4,151,419	-		Psyr_3479	0.62	+2.4
4,151,665	+				-1.0
4,151,691	+				+0.1
4,151,691	+				+0.1
4,151,691	+				+0.5
4,151,692	-				+0.6
4,151,692	-				-1.6
4,151,823	+		Psyr_3480	0.29	-1.1
4,151,823	+		Psyr_3480	0.29	+1.6
4,151,823	+		Psyr_3480	0.29	+0.3
4,151,823	+		Psyr_3480	0.29	-1.9
4,151,824	-		Psyr_3480	0.30	-0.8
4,151,824	-		Psyr_3480	0.30	+0.9
4,151,829	+		Psyr_3480	0.31	+1.1
4,151,830	-		Psyr_3480	0.31	+2.2
4,151,830	-		Psyr_3480	0.31	+0.1
4,152,009	+		Psyr_3480	0.72	+3.2
4,152,056	-		Psyr_3480	0.82	+0.8
4,152,138	+				+0.5
4,152,139	-				+1.6
4,152,139	-				-0.3
4,152,224	-		Psyr_3481	0.21	-0.7
4,152,225	+		Psyr_3481	0.22	+1.0
4,152,225	+		Psyr_3481	0.22	+2.5
4,152,225	+		Psyr_3481	0.22	-0.4
4,152,226	-		Psyr_3481	0.22	+1.0
4,152,226	-		Psyr_3481	0.22	+0.9
4,152,291	+		Psyr_3481	0.38	+1.1
4,152,291	+		Psyr_3481	0.38	+0.9
4,152,292	-		Psyr_3481	0.38	-0.2
4,152,512	+				+0.0
4,152,512	+				+3.2
4,152,512	+				+0.9
4,152,512	+				-0.2
4,152,512	+				-0.6
4,152,512	+				+3.2
4,152,513	-				+1.9
4,152,513	-				-0.3
4,152,513	-				+0.5
4,152,513	-				+1.5
4,152,513	-				-1.4
4,152,513	-				-0.7
4,152,513	-				+1.7
4,152,513	-				-0.3
4,152,513	-				+1.0
4,152,513	-				-0.1
4,152,513	-				+2.2
4,152,513	-				+0.4
4,152,513	-				+0.3
4,152,513	-				+1.3
4,152,513	-				-0.8
4,152,513	-				+0.1
4,152,513	-				+0.2
4,152,513	-				+0.8
4,152,513	-				+3.2
4,152,583	-				+0.1
4,152,612	+				+0.3