Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2430

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
2,811,601	+		Psyr_2429	0.46	-1.2
2,811,616	-		Psyr_2429	0.47	-0.6
2,811,698	-		Psyr_2429	0.55	-0.6
2,811,698	-		Psyr_2429	0.55	-1.7
2,811,745	-		Psyr_2429	0.59	-0.9
2,811,747	+		Psyr_2429	0.59	-1.2
2,811,747	+		Psyr_2429	0.59	-0.9
2,811,748	-		Psyr_2429	0.60	+2.7
2,811,748	-		Psyr_2429	0.60	-1.2
2,811,837	+		Psyr_2429	0.68	-0.4
2,811,837	+		Psyr_2429	0.68	+3.5
2,811,838	-		Psyr_2429	0.68	-1.4
2,812,178	-				-1.4
2,812,205	+				+0.6
2,812,205	+				+0.5
2,812,205	+				-0.4
2,812,205	+				+0.9
2,812,206	-				+1.2
2,812,206	-				+0.9
2,812,256	+				+0.1
2,812,268	+				-0.7
2,812,319	+		Psyr_2430	0.13	+0.1
2,812,319	+		Psyr_2430	0.13	-0.7
2,812,320	-		Psyr_2430	0.13	-0.3
2,812,479	-		Psyr_2430	0.53	-2.4
2,812,570	+		Psyr_2430	0.76	-0.9
2,812,571	-		Psyr_2430	0.76	-0.3
2,812,571	-		Psyr_2430	0.76	-1.3
2,812,571	-		Psyr_2430	0.76	-0.7
2,812,571	-		Psyr_2430	0.76	+0.3
2,812,616	+		Psyr_2430	0.87	+1.1
2,812,617	-		Psyr_2430	0.88	-0.4
2,812,617	-		Psyr_2430	0.88	+1.7
2,812,666	-				+0.3
2,812,682	-				-0.8
2,812,701	+				+3.7
2,812,701	+				+1.4
2,812,701	+				-0.6
2,812,702	-				+0.3
2,812,702	-				-0.4
2,812,738	-				-1.1
2,812,762	-				+0.5
2,812,769	-				-0.5
2,812,870	+				-1.7
2,812,870	+				+1.1
2,812,871	-				+0.3
2,812,875	+				+0.9
2,812,924	+				-0.3
2,813,033	-				+4.4
2,813,554	+		Psyr_2431	0.52	-0.9
2,813,554	+		Psyr_2431	0.52	-1.1
2,813,555	-		Psyr_2431	0.52	+0.3
2,813,555	-		Psyr_2431	0.52	+1.5
2,813,555	-		Psyr_2431	0.52	-1.5
2,813,555	-		Psyr_2431	0.52	+0.2