Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2343

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
2,718,824	+		Psyr_2342	0.41	+0.5
2,718,824	+		Psyr_2342	0.41	-0.2
2,718,825	-		Psyr_2342	0.41	+0.9
2,719,181	+		Psyr_2342	0.64	+2.5
2,719,672	-				+0.5
2,719,672	-				+0.1
2,719,748	+				+3.2
2,719,748	+				+0.1
2,719,762	+				-1.0
2,719,763	-				-0.7
2,719,822	+				+0.9
2,720,002	-		Psyr_2343	0.31	-1.1
2,720,002	-		Psyr_2343	0.31	+0.5
2,720,002	-		Psyr_2343	0.31	+1.9
2,720,148	+		Psyr_2343	0.57	-1.0
2,720,148	+		Psyr_2343	0.57	+2.9
2,720,148	+		Psyr_2343	0.57	+1.3
2,720,148	+		Psyr_2343	0.57	+0.3
2,720,148	+		Psyr_2343	0.57	+0.0
2,720,148	+		Psyr_2343	0.57	+1.2
2,720,149	-		Psyr_2343	0.57	-1.0
2,720,150	+		Psyr_2343	0.57	+0.2
2,720,150	+		Psyr_2343	0.57	-0.2
2,720,150	+		Psyr_2343	0.57	+0.6
2,720,150	+		Psyr_2343	0.57	-0.7
2,720,150	+		Psyr_2343	0.57	+5.1
2,720,150	+		Psyr_2343	0.57	-0.1
2,720,151	-		Psyr_2343	0.57	-0.5
2,720,151	-		Psyr_2343	0.57	-0.9
2,720,151	-		Psyr_2343	0.57	+0.9
2,720,151	-		Psyr_2343	0.57	-0.9
2,720,151	-		Psyr_2343	0.57	+0.3
2,720,152	+		Psyr_2343	0.57	+2.5
2,720,152	+		Psyr_2343	0.57	-1.0
2,720,153	-		Psyr_2343	0.58	-1.3
2,720,204	-		Psyr_2343	0.66	-0.8
2,720,206	+		Psyr_2343	0.67	-0.9
2,720,206	+		Psyr_2343	0.67	+0.0
2,720,206	+		Psyr_2343	0.67	-1.3
2,720,206	+		Psyr_2343	0.67	+0.9
2,720,312	-		Psyr_2343	0.85	-0.5
2,720,312	-		Psyr_2343	0.85	+0.4
2,720,312	-		Psyr_2343	0.85	-0.4
2,720,312	-		Psyr_2343	0.85	+0.4
2,720,312	-		Psyr_2343	0.85	-2.4
2,720,435	+				-0.1
2,720,435	+				+1.0
2,720,436	-				-0.4
2,720,436	-				-0.0
2,720,436	-				-0.9
2,720,436	-				-1.3
2,720,436	-				-0.7
2,720,436	-				-0.1
2,720,436	-				+0.1
2,720,440	+				+0.1
2,720,520	+		Psyr_2344	0.26	+0.4
2,720,520	+		Psyr_2344	0.26	+0.0
2,720,520	+		Psyr_2344	0.26	-0.3
2,720,520	+		Psyr_2344	0.26	-0.4
2,720,534	+		Psyr_2344	0.32	-0.5
2,720,535	-		Psyr_2344	0.32	-1.2
2,720,535	-		Psyr_2344	0.32	-1.5
2,720,535	-		Psyr_2344	0.32	+1.8
2,720,854	+				-1.5
2,720,854	+				-0.7
2,720,855	-				-0.4
2,720,951	+				-1.6
2,720,959	+				+0.5
2,720,960	-				+0.9
2,720,971	-				-0.7
2,720,995	-				-0.8
2,720,995	-				+1.4
2,721,010	-				+1.5
2,721,010	-				-1.8
2,721,096	+				+1.9
2,721,203	-				-2.0
2,721,203	-				-1.1
2,721,214	+				+1.9
2,721,319	+		Psyr_2345	0.11	-0.5
2,721,320	-		Psyr_2345	0.11	-2.8
2,721,321	+		Psyr_2345	0.11	-1.7
2,721,321	+		Psyr_2345	0.11	+0.2
2,721,321	+		Psyr_2345	0.11	-0.9
2,721,322	-		Psyr_2345	0.12	-2.8
2,721,322	-		Psyr_2345	0.12	+1.2
2,721,353	-		Psyr_2345	0.14	+0.6