Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2193

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
2,547,704	-				+3.5
2,547,707	+				+0.1
2,547,707	+				-0.1
2,547,707	+				+1.9
2,547,707	+				-1.6
2,547,707	+				+0.6
2,547,707	+				-0.6
2,547,707	+				+1.6
2,547,708	-				-0.4
2,547,708	-				-1.5
2,547,708	-				+2.5
2,547,708	-				-1.8
2,547,708	-				+0.5
2,547,708	-				+0.6
2,547,711	+				-0.2
2,547,711	+				+0.1
2,547,711	+				-2.0
2,547,798	+				-1.1
2,547,798	+				+0.4
2,547,798	+				+1.8
2,547,802	+				+1.6
2,547,802	+				-1.3
2,547,970	+		Psyr_2192	0.25	-0.9
2,547,970	+		Psyr_2192	0.25	-0.4
2,547,971	-		Psyr_2192	0.26	+0.1
2,547,971	-		Psyr_2192	0.26	-0.5
2,547,976	+		Psyr_2192	0.26	-1.3
2,547,976	+		Psyr_2192	0.26	+1.5
2,547,976	+		Psyr_2192	0.26	-1.1
2,547,977	-		Psyr_2192	0.27	-0.0
2,547,977	-		Psyr_2192	0.27	-2.8
2,547,977	-		Psyr_2192	0.27	+0.4
2,547,977	-		Psyr_2192	0.27	-0.9
2,547,977	-		Psyr_2192	0.27	-0.4
2,548,159	+		Psyr_2192	0.56	-2.2
2,548,222	-		Psyr_2192	0.66	-0.2
2,548,357	+		Psyr_2192	0.88	-0.3
2,548,358	-		Psyr_2192	0.88	-0.2
2,548,358	-		Psyr_2192	0.88	-0.9
2,548,496	-				+4.1
2,548,599	-				-0.4
2,548,921	-		Psyr_2193	0.38	+0.1
2,548,997	+		Psyr_2193	0.44	+0.3
2,549,021	-		Psyr_2193	0.47	+0.3
2,549,191	-		Psyr_2193	0.62	-2.3
2,549,261	+		Psyr_2193	0.68	-1.2
2,549,261	+		Psyr_2193	0.68	-0.5
2,549,277	+		Psyr_2193	0.70	+0.2
2,549,277	+		Psyr_2193	0.70	-0.6
2,549,277	+		Psyr_2193	0.70	-1.3
2,549,277	+		Psyr_2193	0.70	+0.1
2,549,278	-		Psyr_2193	0.70	+0.9
2,549,278	-		Psyr_2193	0.70	-0.3
2,549,278	-		Psyr_2193	0.70	-1.7
2,549,278	-		Psyr_2193	0.70	+3.7
2,549,278	-		Psyr_2193	0.70	-0.6
2,549,429	+		Psyr_2193	0.84	-0.6
2,549,546	-				-0.2
2,549,546	-				-1.3
2,549,675	-				+0.1
2,549,762	-				+1.7
2,549,830	+				+0.9
2,549,849	+				+0.4
2,549,867	+				-0.6
2,549,868	-				-2.4
2,549,868	-				-2.4
2,550,370	+		Psyr_2194	0.24	+0.6