Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0723 and Psyr_0724 overlap by 11 nucleotides Psyr_0724 and Psyr_0725 are separated by 120 nucleotides
Psyr_0723: Psyr_0723 - Sensor protein PilS, at 827,353 to 828,945
_0723
Psyr_0724: Psyr_0724 - conserved hypothetical protein, at 828,935 to 829,174
_0724
Psyr_0725: Psyr_0725 - competence lipoprotein ComL, putative, at 829,295 to 830,317
_0725
Position (kb) 828
829
830 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 827.983 kb on + strand, within Psyr_0723 at 827.983 kb on + strand, within Psyr_0723 at 827.984 kb on - strand, within Psyr_0723 at 828.268 kb on + strand, within Psyr_0723 at 828.268 kb on + strand, within Psyr_0723 at 828.268 kb on + strand, within Psyr_0723 at 828.269 kb on - strand, within Psyr_0723 at 828.269 kb on - strand, within Psyr_0723 at 828.400 kb on + strand, within Psyr_0723 at 828.400 kb on + strand, within Psyr_0723 at 828.400 kb on + strand, within Psyr_0723 at 828.488 kb on + strand, within Psyr_0723 at 828.489 kb on - strand, within Psyr_0723 at 828.524 kb on + strand, within Psyr_0723 at 828.524 kb on + strand, within Psyr_0723 at 828.524 kb on + strand, within Psyr_0723 at 828.524 kb on + strand, within Psyr_0723 at 828.524 kb on + strand, within Psyr_0723 at 828.525 kb on - strand, within Psyr_0723 at 828.525 kb on - strand, within Psyr_0723 at 828.525 kb on - strand, within Psyr_0723 at 828.525 kb on - strand, within Psyr_0723 at 828.525 kb on - strand, within Psyr_0723 at 828.536 kb on + strand, within Psyr_0723 at 828.536 kb on + strand, within Psyr_0723 at 828.536 kb on + strand, within Psyr_0723 at 828.536 kb on + strand, within Psyr_0723 at 828.536 kb on + strand, within Psyr_0723 at 828.536 kb on + strand, within Psyr_0723 at 828.537 kb on - strand, within Psyr_0723 at 828.537 kb on - strand, within Psyr_0723 at 828.537 kb on - strand, within Psyr_0723 at 828.537 kb on - strand, within Psyr_0723 at 828.662 kb on + strand, within Psyr_0723 at 828.770 kb on + strand, within Psyr_0723 at 828.770 kb on + strand, within Psyr_0723 at 828.770 kb on + strand, within Psyr_0723 at 828.771 kb on - strand, within Psyr_0723 at 828.856 kb on + strand at 828.856 kb on + strand at 828.857 kb on - strand at 828.857 kb on - strand at 828.857 kb on - strand at 828.878 kb on + strand at 828.887 kb on + strand at 828.888 kb on - strand at 828.895 kb on + strand at 828.895 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.159 kb on + strand at 829.160 kb on - strand at 829.160 kb on - strand at 829.160 kb on - strand at 829.160 kb on - strand at 829.160 kb on - strand at 829.160 kb on - strand at 829.160 kb on - strand at 829.160 kb on - strand at 829.160 kb on - strand at 829.160 kb on - strand at 829.160 kb on - strand at 829.160 kb on - strand at 829.160 kb on - strand at 829.160 kb on - strand at 829.163 kb on + strand at 829.163 kb on + strand at 829.164 kb on - strand at 829.164 kb on - strand at 829.164 kb on - strand at 829.178 kb on + strand at 829.179 kb on - strand at 829.187 kb on - strand at 829.187 kb on - strand at 829.320 kb on + strand at 829.320 kb on + strand at 829.320 kb on + strand at 829.320 kb on + strand at 829.320 kb on + strand at 829.320 kb on + strand at 829.320 kb on + strand at 829.320 kb on + strand at 829.320 kb on + strand at 829.320 kb on + strand at 829.321 kb on - strand at 829.321 kb on - strand at 829.321 kb on - strand at 829.321 kb on - strand at 829.321 kb on - strand at 829.321 kb on - strand at 829.600 kb on - strand, within Psyr_0725
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 827,983 + Psyr_0723 0.40 -1.5 827,983 + Psyr_0723 0.40 -1.6 827,984 - Psyr_0723 0.40 -0.6 828,268 + Psyr_0723 0.57 -0.5 828,268 + Psyr_0723 0.57 -0.9 828,268 + Psyr_0723 0.57 +0.4 828,269 - Psyr_0723 0.58 +2.1 828,269 - Psyr_0723 0.58 -0.8 828,400 + Psyr_0723 0.66 +0.8 828,400 + Psyr_0723 0.66 -1.4 828,400 + Psyr_0723 0.66 -0.6 828,488 + Psyr_0723 0.71 -0.2 828,489 - Psyr_0723 0.71 +0.3 828,524 + Psyr_0723 0.74 +0.9 828,524 + Psyr_0723 0.74 +0.5 828,524 + Psyr_0723 0.74 -0.7 828,524 + Psyr_0723 0.74 +1.1 828,524 + Psyr_0723 0.74 +3.7 828,525 - Psyr_0723 0.74 +0.2 828,525 - Psyr_0723 0.74 -0.0 828,525 - Psyr_0723 0.74 +1.0 828,525 - Psyr_0723 0.74 +0.1 828,525 - Psyr_0723 0.74 -1.5 828,536 + Psyr_0723 0.74 +0.0 828,536 + Psyr_0723 0.74 -0.1 828,536 + Psyr_0723 0.74 +1.5 828,536 + Psyr_0723 0.74 +0.8 828,536 + Psyr_0723 0.74 -0.2 828,536 + Psyr_0723 0.74 +0.3 828,537 - Psyr_0723 0.74 -0.8 828,537 - Psyr_0723 0.74 -0.0 828,537 - Psyr_0723 0.74 -1.0 828,537 - Psyr_0723 0.74 +0.5 828,662 + Psyr_0723 0.82 +1.2 828,770 + Psyr_0723 0.89 +0.4 828,770 + Psyr_0723 0.89 +2.6 828,770 + Psyr_0723 0.89 +0.4 828,771 - Psyr_0723 0.89 -0.3 828,856 + +3.1 828,856 + -2.4 828,857 - +1.1 828,857 - -2.4 828,857 - +0.7 828,878 + +1.1 828,887 + -1.4 828,888 - +0.5 828,895 + +1.1 828,895 + -0.7 829,159 + +0.2 829,159 + +0.7 829,159 + -0.6 829,159 + -2.4 829,159 + -0.4 829,159 + -0.7 829,159 + +0.6 829,159 + -0.1 829,159 + +0.4 829,159 + -0.2 829,159 + +2.7 829,159 + -0.2 829,159 + -0.1 829,159 + +1.7 829,159 + -1.2 829,159 + -0.4 829,160 - +0.7 829,160 - +0.4 829,160 - -0.6 829,160 - -1.7 829,160 - -0.4 829,160 - +0.8 829,160 - -1.2 829,160 - -0.1 829,160 - -0.1 829,160 - -0.0 829,160 - -0.8 829,160 - -1.5 829,160 - +1.3 829,160 - -0.3 829,163 + +0.1 829,163 + +0.7 829,164 - -0.3 829,164 - -0.6 829,164 - +1.1 829,178 + -1.8 829,179 - -2.2 829,187 - -0.7 829,187 - +0.4 829,320 + -0.2 829,320 + -2.0 829,320 + +2.1 829,320 + -0.4 829,320 + +1.1 829,320 + +1.1 829,320 + -2.5 829,320 + -1.2 829,320 + +0.9 829,320 + -0.9 829,321 - -0.3 829,321 - -0.9 829,321 - +0.8 829,321 - +0.8 829,321 - +0.8 829,321 - -0.4 829,600 - Psyr_0725 0.30 -0.7
Or see this region's nucleotide sequence