Experiment: NoPhageControl|T7phage
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt malI and malX are separated by 174 nucleotides malX and malY are separated by 9 nucleotides
b1620: malI - DNA-binding transcriptional repressor (NCBI), at 1,696,176 to 1,697,204
malI
b1621: malX - fused maltose and glucose-specific PTS enzymes: IIB component -! IIC component (NCBI), at 1,697,379 to 1,698,971
malX
b1622: malY - bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon (NCBI), at 1,698,981 to 1,700,153
malY
Position (kb)
1697
1698
1699 Strain fitness (log2 ratio)
-1
0
1
2 at 1696.599 kb on - strand, within malI at 1696.617 kb on + strand, within malI at 1696.643 kb on + strand, within malI at 1697.394 kb on + strand at 1697.437 kb on - strand at 1697.538 kb on - strand at 1697.538 kb on - strand at 1697.580 kb on - strand, within malX at 1697.580 kb on - strand, within malX at 1697.869 kb on - strand, within malX at 1698.219 kb on - strand, within malX at 1698.303 kb on + strand, within malX at 1698.450 kb on + strand, within malX at 1698.450 kb on + strand, within malX at 1698.495 kb on + strand, within malX at 1698.716 kb on - strand, within malX at 1698.730 kb on - strand, within malX at 1698.918 kb on - strand at 1698.950 kb on + strand at 1698.950 kb on + strand at 1698.952 kb on + strand at 1699.029 kb on - strand at 1699.060 kb on + strand at 1699.068 kb on - strand at 1699.068 kb on - strand at 1699.152 kb on + strand, within malY at 1699.279 kb on + strand, within malY at 1699.279 kb on + strand, within malY at 1699.546 kb on + strand, within malY at 1699.546 kb on + strand, within malY at 1699.566 kb on - strand, within malY at 1699.796 kb on + strand, within malY
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl|T7phage remove 1,696,599 - malI b1620 0.41 +0.5 1,696,617 + malI b1620 0.43 +0.2 1,696,643 + malI b1620 0.45 -0.3 1,697,394 + +0.1 1,697,437 - +0.2 1,697,538 - +0.8 1,697,538 - -0.4 1,697,580 - malX b1621 0.13 -0.3 1,697,580 - malX b1621 0.13 -0.1 1,697,869 - malX b1621 0.31 -1.2 1,698,219 - malX b1621 0.53 +0.2 1,698,303 + malX b1621 0.58 +1.5 1,698,450 + malX b1621 0.67 +0.2 1,698,450 + malX b1621 0.67 +0.7 1,698,495 + malX b1621 0.70 -0.5 1,698,716 - malX b1621 0.84 -0.5 1,698,730 - malX b1621 0.85 -0.3 1,698,918 - -0.4 1,698,950 + +1.2 1,698,950 + +0.6 1,698,952 + +1.9 1,699,029 - -0.2 1,699,060 + -0.4 1,699,068 - +0.6 1,699,068 - +1.0 1,699,152 + malY b1622 0.15 +0.1 1,699,279 + malY b1622 0.25 -0.3 1,699,279 + malY b1622 0.25 -0.2 1,699,546 + malY b1622 0.48 -0.2 1,699,546 + malY b1622 0.48 -0.1 1,699,566 - malY b1622 0.50 +0.4 1,699,796 + malY b1622 0.69 +0.3
Or see this region's nucleotide sequence