Strain Fitness in Escherichia coli BW25113 around b1888

Experiment: HSDP4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	HSDP4
1,970,390	-	tar	b1886	0.80	+0.9
1,970,488	-	tar	b1886	0.86	+1.1
1,970,489	+	tar	b1886	0.86	+0.8
1,970,497	+	tar	b1886	0.87	-0.6
1,970,502	+	tar	b1886	0.87	-1.8
1,970,602	+				+1.2
1,970,656	-				-1.7
1,970,666	+				-4.2
1,970,676	+				+0.0
1,970,765	-				+1.4
1,970,884	+				+0.4
1,970,989	-	cheW	b1887	0.26	-0.5
1,971,037	-	cheW	b1887	0.35	+0.4
1,971,075	+	cheW	b1887	0.43	+0.8
1,971,116	+	cheW	b1887	0.51	-0.2
1,971,129	-	cheW	b1887	0.53	+0.4
1,971,140	-	cheW	b1887	0.56	-4.5
1,971,165	+	cheW	b1887	0.61	-2.0
1,971,165	+	cheW	b1887	0.61	-0.9
1,971,173	-	cheW	b1887	0.62	+2.3
1,971,247	+	cheW	b1887	0.77	-4.1
1,971,247	+	cheW	b1887	0.77	-0.6
1,971,250	+	cheW	b1887	0.77	-0.1
1,971,251	+	cheW	b1887	0.78	-3.6
1,971,251	+	cheW	b1887	0.78	+0.6
1,971,272	+	cheW	b1887	0.82	-4.6
1,971,275	-	cheW	b1887	0.82	-0.5
1,971,539	+				-0.7
1,971,750	+	cheA	b1888	0.19	+0.1
1,971,957	-	cheA	b1888	0.29	+0.4
1,972,064	+	cheA	b1888	0.35	-4.7
1,972,278	-	cheA	b1888	0.45	+0.2
1,972,498	+	cheA	b1888	0.57	+0.1
1,972,631	+	cheA	b1888	0.63	-2.8
1,972,777	+	cheA	b1888	0.71	+0.4
1,972,859	+	cheA	b1888	0.75	+0.1
1,972,874	+	cheA	b1888	0.76	-1.0
1,972,963	+	cheA	b1888	0.80	+0.8
1,973,015	-	cheA	b1888	0.83	-3.9
1,973,103	-	cheA	b1888	0.87	+1.0
1,973,279	-				-0.4
1,973,279	-				-0.1
1,973,443	-				+2.7
1,973,443	-				-2.1
1,973,577	-	motB	b1889	0.24	-4.0
1,973,595	-	motB	b1889	0.26	+1.3
1,973,697	+	motB	b1889	0.37	+1.1
1,973,846	-	motB	b1889	0.53	-0.7
1,973,850	-	motB	b1889	0.54	+0.3
1,974,089	-	motB	b1889	0.79	+1.4
1,974,089	-	motB	b1889	0.79	+0.7
1,974,197	+				-0.2
1,974,226	+				-0.4
1,974,233	+				-2.3
1,974,233	+				-2.8