Strain Fitness in Escherichia coli BW25113 around b2172

Experiment: RhdML5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RhdML5
2,263,286	-	yeiW	b4502	0.87	+0.1
2,263,321	-				+0.5
2,263,563	+	yeiP	b2171	0.16	+0.5
2,263,563	+	yeiP	b2171	0.16	+0.4
2,263,575	+	yeiP	b2171	0.18	-0.0
2,263,743	-	yeiP	b2171	0.47	-0.9
2,263,813	+	yeiP	b2171	0.60	-0.8
2,263,826	+	yeiP	b2171	0.62	-1.9
2,263,826	+	yeiP	b2171	0.62	-1.4
2,263,908	-	yeiP	b2171	0.76	+1.4
2,263,929	-	yeiP	b2171	0.80	-0.4
2,263,960	-	yeiP	b2171	0.85	-3.1
2,264,034	-				-1.3
2,264,039	+				-0.9
2,264,174	-				+0.1
2,264,184	-				+0.0
2,264,228	-				-0.7
2,264,233	+				+1.0
2,264,272	-				+0.4
2,264,316	-				-1.4
2,264,316	-				-0.5
2,264,482	-	yeiQ	b2172	0.15	-0.4
2,264,482	-	yeiQ	b2172	0.15	+0.9
2,264,497	+	yeiQ	b2172	0.16	+2.0
2,264,497	+	yeiQ	b2172	0.16	-1.6
2,264,497	+	yeiQ	b2172	0.16	+0.5
2,264,505	-	yeiQ	b2172	0.16	-2.7
2,264,565	+	yeiQ	b2172	0.20	-1.1
2,264,565	+	yeiQ	b2172	0.20	-0.5
2,264,672	-	yeiQ	b2172	0.28	-0.7
2,264,946	+	yeiQ	b2172	0.46	+0.2
2,264,946	+	yeiQ	b2172	0.46	+0.7
2,265,000	-	yeiQ	b2172	0.50	+0.3
2,265,000	-	yeiQ	b2172	0.50	-2.1
2,265,002	-	yeiQ	b2172	0.50	-0.2
2,265,069	-	yeiQ	b2172	0.55	-2.2
2,265,069	-	yeiQ	b2172	0.55	-1.6
2,265,167	+	yeiQ	b2172	0.61	-0.1
2,265,167	+	yeiQ	b2172	0.61	-1.8
2,265,252	-	yeiQ	b2172	0.67	+0.3
2,265,271	+	yeiQ	b2172	0.68	-1.6
2,265,379	+	yeiQ	b2172	0.76	-1.2
2,265,379	-	yeiQ	b2172	0.76	-0.0
2,265,455	+	yeiQ	b2172	0.81	-0.8
2,265,455	+	yeiQ	b2172	0.81	+0.2
2,265,488	-	yeiQ	b2172	0.83	-0.8
2,265,694	-				-0.7
2,265,889	+				+0.5
2,266,013	+	yeiR	b2173	0.16	+0.8
2,266,036	+	yeiR	b2173	0.19	-0.4
2,266,036	+	yeiR	b2173	0.19	+1.0
2,266,075	+	yeiR	b2173	0.23	+0.1
2,266,091	-	yeiR	b2173	0.24	+0.1
2,266,182	-	yeiR	b2173	0.34	+1.7
2,266,182	-	yeiR	b2173	0.34	+1.4
2,266,191	-	yeiR	b2173	0.34	+0.4
2,266,207	+	yeiR	b2173	0.36	-0.1
2,266,223	-	yeiR	b2173	0.38	-1.9
2,266,223	-	yeiR	b2173	0.38	-0.3
2,266,421	-	yeiR	b2173	0.58	+0.9
2,266,421	-	yeiR	b2173	0.58	-0.8
2,266,461	-	yeiR	b2173	0.62	-1.3
2,266,588	-	yeiR	b2173	0.75	-0.1
2,266,651	+	yeiR	b2173	0.81	-0.0
2,266,651	+	yeiR	b2173	0.81	+0.5
2,266,666	+	yeiR	b2173	0.83	-0.2