Strain Fitness in Escherichia coli BW25113 around b4408

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
2,921,209	-	yqcB	b2791	0.24	-0.5
2,921,317	+	yqcB	b2791	0.37	+0.5
2,921,351	+	yqcB	b2791	0.42	+0.0
2,921,504	+	yqcB	b2791	0.61	-1.0
2,921,504	+	yqcB	b2791	0.61	-0.5
2,921,547	-	yqcB	b2791	0.67	-0.4
2,921,631	-	yqcB	b2791	0.78	+0.4
2,921,637	-	yqcB	b2791	0.78	-0.9
2,921,637	-	yqcB	b2791	0.78	+0.6
2,921,710	-	yqcB	b2791	0.88	+1.0
2,921,710	-	yqcB	b2791	0.88	-0.1
2,921,785	-				+0.0
2,921,795	-				-1.4
2,921,795	-				+0.9
2,921,820	-				+0.1
2,921,882	+	yqcC	b2792	0.23	-0.2
2,921,980	-	yqcC	b2792	0.53	+1.2
2,921,980	-	yqcC	b2792	0.53	+0.2
2,921,992	+	yqcC	b2792	0.56	-0.1
2,922,015	-	yqcC	b2792	0.63	+0.5
2,922,118	-				-1.1
2,922,131	+				-0.5
2,922,194	+				+0.5
2,922,204	-				+0.1
2,922,317	-	csrB	b4408	0.38	+1.0
2,922,407	+	csrB	b4408	0.62	+0.4
2,922,407	+	csrB	b4408	0.62	+0.9
2,922,418	+	csrB	b4408	0.65	+0.7
2,922,443	-	csrB	b4408	0.72	+0.7
2,922,488	-	csrB	b4408	0.84	-0.1
2,922,501	-	csrB	b4408	0.88	-0.4
2,922,544	+				+1.0
2,922,573	+				+0.2
2,922,573	+				-0.3
2,922,686	-				-1.4
2,922,705	+				-0.1
2,922,705	+				-0.8
2,922,717	-				-0.8
2,922,717	-				-0.1
2,922,846	+	syd	b2793	0.16	+0.3
2,922,848	+	syd	b2793	0.17	-0.4
2,922,848	+	syd	b2793	0.17	+0.7
2,922,859	+	syd	b2793	0.19	+0.0
2,922,859	+	syd	b2793	0.19	+0.2
2,922,869	+	syd	b2793	0.21	+0.9
2,922,892	-	syd	b2793	0.25	-0.1
2,922,929	-	syd	b2793	0.32	+0.6
2,922,946	-	syd	b2793	0.35	-0.1
2,922,970	-	syd	b2793	0.39	-0.3
2,922,982	-	syd	b2793	0.41	+0.3
2,923,017	-	syd	b2793	0.48	+1.0
2,923,017	-	syd	b2793	0.48	+0.5
2,923,042	-	syd	b2793	0.52	+0.3
2,923,048	+	syd	b2793	0.53	-0.3
2,923,048	+	syd	b2793	0.53	+0.2
2,923,066	+	syd	b2793	0.57	+0.1
2,923,139	+	syd	b2793	0.70	+0.6
2,923,161	-	syd	b2793	0.74	+0.4
2,923,161	-	syd	b2793	0.74	+1.4
2,923,161	-	syd	b2793	0.74	-1.2
2,923,207	-	syd	b2793	0.82	-0.1
2,923,225	+	syd	b2793	0.86	+0.2
2,923,233	-	syd	b2793	0.87	+0.2
2,923,235	+	syd	b2793	0.88	+0.8
2,923,235	+	syd	b2793	0.88	-0.0
2,923,255	+				+0.5
2,923,301	+				-0.1
2,923,361	-				+1.0
2,923,361	-				-0.8
2,923,454	-				+0.4
2,923,460	-	yqcD	b2794	0.11	+0.5
2,923,537	-	yqcD	b2794	0.20	+1.8
2,923,537	-	yqcD	b2794	0.20	-0.0