Strain Fitness in Pseudomonas sp. RS175 around PFR28_02361

Experiment: methyl-trans-p-coumarate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methyl-trans-p-coumarate (C)
2,820,870	+		PFR28_02360	0.31	-0.0
2,820,871	-		PFR28_02360	0.31	-2.0
2,820,871	-		PFR28_02360	0.31	+1.0
2,820,871	-		PFR28_02360	0.31	-0.9
2,820,871	-		PFR28_02360	0.31	+2.1
2,820,871	-		PFR28_02360	0.31	+1.7
2,820,871	-		PFR28_02360	0.31	-0.6
2,820,871	-		PFR28_02360	0.31	+0.5
2,820,874	+		PFR28_02360	0.31	-1.3
2,820,874	+		PFR28_02360	0.31	-2.3
2,820,874	+		PFR28_02360	0.31	-1.2
2,820,875	-		PFR28_02360	0.31	+1.6
2,820,875	-		PFR28_02360	0.31	-1.3
2,820,931	+		PFR28_02360	0.36	+0.9
2,820,931	+		PFR28_02360	0.36	+1.8
2,820,932	-		PFR28_02360	0.36	-1.2
2,821,141	+		PFR28_02360	0.55	+0.7
2,821,141	+		PFR28_02360	0.55	-0.1
2,821,141	+		PFR28_02360	0.55	-0.3
2,821,142	-		PFR28_02360	0.55	-0.8
2,821,142	-		PFR28_02360	0.55	-1.2
2,821,232	-		PFR28_02360	0.63	+1.1
2,821,232	-		PFR28_02360	0.63	-0.5
2,821,232	-		PFR28_02360	0.63	-0.3
2,821,537	-				+0.2
2,821,537	-				-2.3
2,821,673	-				-3.0
2,821,812	-				-0.2
2,821,868	+				-3.7
2,821,869	-				-3.1
2,821,880	+				-3.2
2,821,880	+				-1.3
2,821,881	-				-3.1
2,821,881	-				-1.1
2,821,881	-				-4.6
2,821,889	-		PFR28_02361	0.11	-0.9
2,822,026	-		PFR28_02361	0.30	-2.5
2,822,027	+		PFR28_02361	0.30	-1.8
2,822,027	+		PFR28_02361	0.30	-3.0
2,822,027	+		PFR28_02361	0.30	-2.3
2,822,027	+		PFR28_02361	0.30	-2.8
2,822,028	-		PFR28_02361	0.31	-2.8
2,822,028	-		PFR28_02361	0.31	+0.3
2,822,028	-		PFR28_02361	0.31	-1.1
2,822,028	-		PFR28_02361	0.31	-1.3
2,822,028	-		PFR28_02361	0.31	-1.8
2,822,028	-		PFR28_02361	0.31	-3.3
2,822,078	+		PFR28_02361	0.38	-3.6
2,822,078	+		PFR28_02361	0.38	-1.8
2,822,079	-		PFR28_02361	0.38	-2.6
2,822,264	+		PFR28_02361	0.64	-0.4
2,822,265	-		PFR28_02361	0.64	+0.2
2,822,268	+		PFR28_02361	0.64	-1.3
2,822,268	+		PFR28_02361	0.64	-3.0
2,822,268	+		PFR28_02361	0.64	-2.9
2,822,268	+		PFR28_02361	0.64	+0.8
2,822,268	+		PFR28_02361	0.64	-1.9
2,822,268	+		PFR28_02361	0.64	-2.6
2,822,268	+		PFR28_02361	0.64	-4.0
2,822,268	+		PFR28_02361	0.64	-2.4
2,822,268	+		PFR28_02361	0.64	-2.2
2,822,269	-		PFR28_02361	0.64	-1.0
2,822,269	-		PFR28_02361	0.64	-1.8
2,822,269	-		PFR28_02361	0.64	-0.9
2,822,269	-		PFR28_02361	0.64	-1.8
2,822,270	+		PFR28_02361	0.64	-0.8
2,822,270	+		PFR28_02361	0.64	-0.5
2,822,270	+		PFR28_02361	0.64	-1.1
2,822,270	+		PFR28_02361	0.64	-3.7
2,822,270	+		PFR28_02361	0.64	-0.7
2,822,270	+		PFR28_02361	0.64	-2.6
2,822,270	+		PFR28_02361	0.64	-3.0
2,822,270	+		PFR28_02361	0.64	-4.1
2,822,270	+		PFR28_02361	0.64	-2.7
2,822,270	+		PFR28_02361	0.64	-2.2
2,822,270	+		PFR28_02361	0.64	-4.2
2,822,271	-		PFR28_02361	0.65	-2.5
2,822,271	-		PFR28_02361	0.65	-1.0
2,822,271	-		PFR28_02361	0.65	-1.2
2,822,271	-		PFR28_02361	0.65	-1.5
2,822,271	-		PFR28_02361	0.65	-4.4
2,822,271	-		PFR28_02361	0.65	-2.0
2,822,271	-		PFR28_02361	0.65	-0.8
2,822,271	-		PFR28_02361	0.65	+0.1
2,822,271	-		PFR28_02361	0.65	+1.3
2,822,271	-		PFR28_02361	0.65	-1.8
2,822,271	-		PFR28_02361	0.65	-1.6
2,822,442	+		PFR28_02361	0.89	-3.7
2,822,443	-		PFR28_02361	0.89	-0.9
2,822,516	+				-1.8
2,822,516	+				-0.4
2,822,516	+				-0.4
2,822,516	+				+1.2
2,822,516	+				-3.2
2,822,516	+				+0.3
2,822,516	+				-1.6
2,822,594	+				-3.6
2,822,594	+				+1.8
2,822,912	+		PFR28_02362	0.25	-0.2
2,822,912	+		PFR28_02362	0.25	-0.3
2,822,912	+		PFR28_02362	0.25	-0.2
2,822,912	+		PFR28_02362	0.25	-1.3
2,822,913	-		PFR28_02362	0.25	-0.6
2,822,913	-		PFR28_02362	0.25	-0.4
2,822,913	-		PFR28_02362	0.25	-1.2
2,822,913	-		PFR28_02362	0.25	+0.5
2,822,933	+		PFR28_02362	0.27	+0.5
2,822,934	-		PFR28_02362	0.27	-2.0
2,823,014	+		PFR28_02362	0.32	+0.5
2,823,014	+		PFR28_02362	0.32	+0.8
2,823,015	-		PFR28_02362	0.32	-0.4
2,823,080	+		PFR28_02362	0.37	+2.5
2,823,080	+		PFR28_02362	0.37	+0.1
2,823,080	+		PFR28_02362	0.37	-0.1
2,823,080	+		PFR28_02362	0.37	-0.2
2,823,080	+		PFR28_02362	0.37	+0.4
2,823,081	-		PFR28_02362	0.37	+0.0
2,823,081	-		PFR28_02362	0.37	-1.0
2,823,081	-		PFR28_02362	0.37	-1.3
2,823,081	-		PFR28_02362	0.37	+0.9
2,823,081	-		PFR28_02362	0.37	+0.5
2,823,081	-		PFR28_02362	0.37	-1.2
2,823,173	+		PFR28_02362	0.43	+1.1
2,823,173	+		PFR28_02362	0.43	-3.8
2,823,173	+		PFR28_02362	0.43	-1.1
2,823,173	+		PFR28_02362	0.43	-0.5
2,823,173	+		PFR28_02362	0.43	-0.9
2,823,174	-		PFR28_02362	0.43	+0.2
2,823,174	-		PFR28_02362	0.43	-1.3
2,823,174	-		PFR28_02362	0.43	-2.5
2,823,174	-		PFR28_02362	0.43	+0.5
2,823,174	-		PFR28_02362	0.43	+0.4
2,823,174	-		PFR28_02362	0.43	-1.0
2,823,174	-		PFR28_02362	0.43	-2.0
2,823,174	-		PFR28_02362	0.43	-0.7
2,823,174	-		PFR28_02362	0.43	+0.3
2,823,174	-		PFR28_02362	0.43	-1.5
2,823,174	-		PFR28_02362	0.43	-0.1
2,823,174	-		PFR28_02362	0.43	+1.2
2,823,320	+		PFR28_02362	0.53	-0.6
2,823,320	+		PFR28_02362	0.53	+2.1
2,823,479	+		PFR28_02362	0.64	-0.1
2,823,479	+		PFR28_02362	0.64	+0.8
2,823,480	-		PFR28_02362	0.65	+0.2
2,823,480	-		PFR28_02362	0.65	+0.1
2,823,480	-		PFR28_02362	0.65	+1.8
2,823,480	-		PFR28_02362	0.65	+1.7