Strain Fitness in Bosea sp. OAE506 around ABIE41_RS17875

Experiment: R2A no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS17865 and ABIE41_RS17870 are separated by 121 nucleotidesABIE41_RS17870 and ABIE41_RS17875 are separated by 93 nucleotidesABIE41_RS17875 and ABIE41_RS17880 are separated by 11 nucleotides ABIE41_RS17865: ABIE41_RS17865 - ribonuclease J, at 3,677,914 to 3,679,584 _RS17865 ABIE41_RS17870: ABIE41_RS17870 - biotin--[acetyl-CoA-carboxylase] ligase, at 3,679,706 to 3,680,482 _RS17870 ABIE41_RS17875: ABIE41_RS17875 - NADH-quinone oxidoreductase subunit NuoN, at 3,680,576 to 3,682,003 _RS17875 ABIE41_RS17880: ABIE41_RS17880 - NADH-quinone oxidoreductase subunit M, at 3,682,015 to 3,683,526 _RS17880 Position (kb) 3680 3681 3682 3683Strain fitness (log2 ratio) -1 0 1at 3679.663 kb on - strandat 3680.511 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A no stress control
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3,679,663 - +0.8
3,680,511 + +1.5

Or see this region's nucleotide sequence