Strain Fitness in Bosea sp. OAE506 around ABIE41_RS14805

Experiment: R2A no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS14795 and ABIE41_RS14800 are separated by 187 nucleotidesABIE41_RS14800 and ABIE41_RS14805 are separated by 97 nucleotidesABIE41_RS14805 and ABIE41_RS14810 are separated by 121 nucleotidesABIE41_RS14810 and ABIE41_RS14815 are separated by 131 nucleotides ABIE41_RS14795: ABIE41_RS14795 - magnesium transporter, at 3,024,762 to 3,026,168 _RS14795 ABIE41_RS14800: ABIE41_RS14800 - tRNA-Leu, at 3,026,356 to 3,026,440 _RS14800 ABIE41_RS14805: ABIE41_RS14805 - FliM/FliN family flagellar motor switch protein, at 3,026,538 to 3,026,807 _RS14805 ABIE41_RS14810: ABIE41_RS14810 - lipoyl(octanoyl) transferase LipB, at 3,026,929 to 3,027,624 _RS14810 ABIE41_RS14815: ABIE41_RS14815 - carboxyl transferase domain-containing protein, at 3,027,756 to 3,029,363 _RS14815 Position (kb) 3026 3027Strain fitness (log2 ratio) -1 0 1at 3025.819 kb on + strand, within ABIE41_RS14795at 3025.819 kb on + strand, within ABIE41_RS14795at 3025.819 kb on + strand, within ABIE41_RS14795at 3025.819 kb on + strand, within ABIE41_RS14795at 3025.820 kb on - strand, within ABIE41_RS14795at 3025.820 kb on - strand, within ABIE41_RS14795at 3025.820 kb on - strand, within ABIE41_RS14795at 3026.569 kb on + strand, within ABIE41_RS14805at 3026.569 kb on + strand, within ABIE41_RS14805at 3026.570 kb on - strand, within ABIE41_RS14805at 3026.738 kb on - strand, within ABIE41_RS14805at 3026.738 kb on - strand, within ABIE41_RS14805at 3026.738 kb on - strand, within ABIE41_RS14805at 3026.738 kb on - strand, within ABIE41_RS14805at 3026.738 kb on - strand, within ABIE41_RS14805at 3026.826 kb on + strandat 3026.826 kb on + strandat 3026.826 kb on + strandat 3026.827 kb on - strandat 3026.827 kb on - strandat 3026.827 kb on - strandat 3027.736 kb on + strandat 3027.737 kb on - strandat 3027.737 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A no stress control
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3,025,819 + ABIE41_RS14795 0.75 +0.3
3,025,819 + ABIE41_RS14795 0.75 +0.2
3,025,819 + ABIE41_RS14795 0.75 -0.0
3,025,819 + ABIE41_RS14795 0.75 -0.1
3,025,820 - ABIE41_RS14795 0.75 -1.5
3,025,820 - ABIE41_RS14795 0.75 -0.6
3,025,820 - ABIE41_RS14795 0.75 +0.1
3,026,569 + ABIE41_RS14805 0.11 +1.7
3,026,569 + ABIE41_RS14805 0.11 -1.5
3,026,570 - ABIE41_RS14805 0.12 -0.5
3,026,738 - ABIE41_RS14805 0.74 +1.4
3,026,738 - ABIE41_RS14805 0.74 +0.0
3,026,738 - ABIE41_RS14805 0.74 +0.1
3,026,738 - ABIE41_RS14805 0.74 +1.2
3,026,738 - ABIE41_RS14805 0.74 -0.5
3,026,826 + -0.1
3,026,826 + +1.2
3,026,826 + +0.5
3,026,827 - +0.9
3,026,827 - -0.2
3,026,827 - +0.1
3,027,736 + +1.1
3,027,737 - -0.4
3,027,737 - -0.0

Or see this region's nucleotide sequence