Experiment: R2A no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS14795 and ABIE41_RS14800 are separated by 187 nucleotides ABIE41_RS14800 and ABIE41_RS14805 are separated by 97 nucleotides ABIE41_RS14805 and ABIE41_RS14810 are separated by 121 nucleotides ABIE41_RS14810 and ABIE41_RS14815 are separated by 131 nucleotides
ABIE41_RS14795: ABIE41_RS14795 - magnesium transporter, at 3,024,762 to 3,026,168
_RS14795
ABIE41_RS14800: ABIE41_RS14800 - tRNA-Leu, at 3,026,356 to 3,026,440
_RS14800
ABIE41_RS14805: ABIE41_RS14805 - FliM/FliN family flagellar motor switch protein, at 3,026,538 to 3,026,807
_RS14805
ABIE41_RS14810: ABIE41_RS14810 - lipoyl(octanoyl) transferase LipB, at 3,026,929 to 3,027,624
_RS14810
ABIE41_RS14815: ABIE41_RS14815 - carboxyl transferase domain-containing protein, at 3,027,756 to 3,029,363
_RS14815
Position (kb)
3026
3027 Strain fitness (log2 ratio)
-1
0
1 at 3025.819 kb on + strand, within ABIE41_RS14795 at 3025.819 kb on + strand, within ABIE41_RS14795 at 3025.819 kb on + strand, within ABIE41_RS14795 at 3025.819 kb on + strand, within ABIE41_RS14795 at 3025.820 kb on - strand, within ABIE41_RS14795 at 3025.820 kb on - strand, within ABIE41_RS14795 at 3025.820 kb on - strand, within ABIE41_RS14795 at 3026.569 kb on + strand, within ABIE41_RS14805 at 3026.569 kb on + strand, within ABIE41_RS14805 at 3026.570 kb on - strand, within ABIE41_RS14805 at 3026.738 kb on - strand, within ABIE41_RS14805 at 3026.738 kb on - strand, within ABIE41_RS14805 at 3026.738 kb on - strand, within ABIE41_RS14805 at 3026.738 kb on - strand, within ABIE41_RS14805 at 3026.738 kb on - strand, within ABIE41_RS14805 at 3026.826 kb on + strand at 3026.826 kb on + strand at 3026.826 kb on + strand at 3026.827 kb on - strand at 3026.827 kb on - strand at 3026.827 kb on - strand at 3027.736 kb on + strand at 3027.737 kb on - strand at 3027.737 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A no stress control remove 3,025,819 + ABIE41_RS14795 0.75 +0.3 3,025,819 + ABIE41_RS14795 0.75 +0.2 3,025,819 + ABIE41_RS14795 0.75 -0.0 3,025,819 + ABIE41_RS14795 0.75 -0.1 3,025,820 - ABIE41_RS14795 0.75 -1.5 3,025,820 - ABIE41_RS14795 0.75 -0.6 3,025,820 - ABIE41_RS14795 0.75 +0.1 3,026,569 + ABIE41_RS14805 0.11 +1.7 3,026,569 + ABIE41_RS14805 0.11 -1.5 3,026,570 - ABIE41_RS14805 0.12 -0.5 3,026,738 - ABIE41_RS14805 0.74 +1.4 3,026,738 - ABIE41_RS14805 0.74 +0.0 3,026,738 - ABIE41_RS14805 0.74 +0.1 3,026,738 - ABIE41_RS14805 0.74 +1.2 3,026,738 - ABIE41_RS14805 0.74 -0.5 3,026,826 + -0.1 3,026,826 + +1.2 3,026,826 + +0.5 3,026,827 - +0.9 3,026,827 - -0.2 3,026,827 - +0.1 3,027,736 + +1.1 3,027,737 - -0.4 3,027,737 - -0.0
Or see this region's nucleotide sequence