Experiment: R2A no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS07260 and ABIE41_RS07265 are separated by 14 nucleotides ABIE41_RS07265 and ABIE41_RS07270 overlap by 4 nucleotides ABIE41_RS07270 and ABIE41_RS07275 are separated by 31 nucleotides
ABIE41_RS07260: ABIE41_RS07260 - cobaltochelatase subunit CobS, at 1,497,642 to 1,498,628
_RS07260
ABIE41_RS07265: ABIE41_RS07265 - GNAT family N-acetyltransferase, at 1,498,643 to 1,499,059
_RS07265
ABIE41_RS07270: ABIE41_RS07270 - cobaltochelatase subunit CobT, at 1,499,056 to 1,500,958
_RS07270
ABIE41_RS07275: ABIE41_RS07275 - esterase-like activity of phytase family protein, at 1,500,990 to 1,501,991
_RS07275
Position (kb)
1499
1500
1501 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1498.712 kb on + strand, within ABIE41_RS07265 at 1498.712 kb on + strand, within ABIE41_RS07265 at 1498.712 kb on + strand, within ABIE41_RS07265 at 1498.712 kb on + strand, within ABIE41_RS07265 at 1498.712 kb on + strand, within ABIE41_RS07265 at 1498.712 kb on + strand, within ABIE41_RS07265 at 1498.713 kb on - strand, within ABIE41_RS07265 at 1498.713 kb on - strand, within ABIE41_RS07265 at 1498.713 kb on - strand, within ABIE41_RS07265 at 1498.713 kb on - strand, within ABIE41_RS07265 at 1498.714 kb on + strand, within ABIE41_RS07265 at 1498.714 kb on + strand, within ABIE41_RS07265 at 1498.934 kb on + strand, within ABIE41_RS07265 at 1498.934 kb on + strand, within ABIE41_RS07265 at 1498.934 kb on + strand, within ABIE41_RS07265 at 1498.935 kb on - strand, within ABIE41_RS07265 at 1498.942 kb on + strand, within ABIE41_RS07265 at 1498.942 kb on + strand, within ABIE41_RS07265 at 1498.943 kb on - strand, within ABIE41_RS07265 at 1498.943 kb on - strand, within ABIE41_RS07265 at 1498.971 kb on - strand, within ABIE41_RS07265 at 1499.055 kb on + strand at 1499.055 kb on + strand at 1499.055 kb on + strand at 1499.056 kb on - strand at 1501.381 kb on - strand, within ABIE41_RS07275 at 1501.381 kb on - strand, within ABIE41_RS07275 at 1501.383 kb on + strand, within ABIE41_RS07275 at 1501.383 kb on + strand, within ABIE41_RS07275 at 1501.384 kb on - strand, within ABIE41_RS07275 at 1501.384 kb on - strand, within ABIE41_RS07275 at 1501.384 kb on - strand, within ABIE41_RS07275 at 1501.423 kb on - strand, within ABIE41_RS07275 at 1501.423 kb on - strand, within ABIE41_RS07275 at 1501.423 kb on - strand, within ABIE41_RS07275 at 1501.941 kb on - strand at 1501.941 kb on - strand at 1501.941 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A no stress control remove 1,498,712 + ABIE41_RS07265 0.17 +1.0 1,498,712 + ABIE41_RS07265 0.17 +0.8 1,498,712 + ABIE41_RS07265 0.17 +0.7 1,498,712 + ABIE41_RS07265 0.17 -0.4 1,498,712 + ABIE41_RS07265 0.17 -0.3 1,498,712 + ABIE41_RS07265 0.17 +0.0 1,498,713 - ABIE41_RS07265 0.17 -0.9 1,498,713 - ABIE41_RS07265 0.17 -0.4 1,498,713 - ABIE41_RS07265 0.17 -0.4 1,498,713 - ABIE41_RS07265 0.17 +0.3 1,498,714 + ABIE41_RS07265 0.17 -0.9 1,498,714 + ABIE41_RS07265 0.17 -0.6 1,498,934 + ABIE41_RS07265 0.70 -0.6 1,498,934 + ABIE41_RS07265 0.70 -0.4 1,498,934 + ABIE41_RS07265 0.70 -0.2 1,498,935 - ABIE41_RS07265 0.70 -0.6 1,498,942 + ABIE41_RS07265 0.72 -0.6 1,498,942 + ABIE41_RS07265 0.72 +1.4 1,498,943 - ABIE41_RS07265 0.72 +1.9 1,498,943 - ABIE41_RS07265 0.72 -1.3 1,498,971 - ABIE41_RS07265 0.79 -2.6 1,499,055 + -0.2 1,499,055 + +1.1 1,499,055 + +2.4 1,499,056 - -1.8 1,501,381 - ABIE41_RS07275 0.39 -0.5 1,501,381 - ABIE41_RS07275 0.39 -0.4 1,501,383 + ABIE41_RS07275 0.39 -0.3 1,501,383 + ABIE41_RS07275 0.39 +1.0 1,501,384 - ABIE41_RS07275 0.39 -3.0 1,501,384 - ABIE41_RS07275 0.39 +0.4 1,501,384 - ABIE41_RS07275 0.39 -0.2 1,501,423 - ABIE41_RS07275 0.43 +1.1 1,501,423 - ABIE41_RS07275 0.43 -0.1 1,501,423 - ABIE41_RS07275 0.43 -0.9 1,501,941 - -0.3 1,501,941 - -0.7 1,501,941 - -0.1
Or see this region's nucleotide sequence