Strain Fitness in Bosea sp. OAE506 around ABIE41_RS07270

Experiment: R2A no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS07260 and ABIE41_RS07265 are separated by 14 nucleotidesABIE41_RS07265 and ABIE41_RS07270 overlap by 4 nucleotidesABIE41_RS07270 and ABIE41_RS07275 are separated by 31 nucleotides ABIE41_RS07260: ABIE41_RS07260 - cobaltochelatase subunit CobS, at 1,497,642 to 1,498,628 _RS07260 ABIE41_RS07265: ABIE41_RS07265 - GNAT family N-acetyltransferase, at 1,498,643 to 1,499,059 _RS07265 ABIE41_RS07270: ABIE41_RS07270 - cobaltochelatase subunit CobT, at 1,499,056 to 1,500,958 _RS07270 ABIE41_RS07275: ABIE41_RS07275 - esterase-like activity of phytase family protein, at 1,500,990 to 1,501,991 _RS07275 Position (kb) 1499 1500 1501Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1498.712 kb on + strand, within ABIE41_RS07265at 1498.712 kb on + strand, within ABIE41_RS07265at 1498.712 kb on + strand, within ABIE41_RS07265at 1498.712 kb on + strand, within ABIE41_RS07265at 1498.712 kb on + strand, within ABIE41_RS07265at 1498.712 kb on + strand, within ABIE41_RS07265at 1498.713 kb on - strand, within ABIE41_RS07265at 1498.713 kb on - strand, within ABIE41_RS07265at 1498.713 kb on - strand, within ABIE41_RS07265at 1498.713 kb on - strand, within ABIE41_RS07265at 1498.714 kb on + strand, within ABIE41_RS07265at 1498.714 kb on + strand, within ABIE41_RS07265at 1498.934 kb on + strand, within ABIE41_RS07265at 1498.934 kb on + strand, within ABIE41_RS07265at 1498.934 kb on + strand, within ABIE41_RS07265at 1498.935 kb on - strand, within ABIE41_RS07265at 1498.942 kb on + strand, within ABIE41_RS07265at 1498.942 kb on + strand, within ABIE41_RS07265at 1498.943 kb on - strand, within ABIE41_RS07265at 1498.943 kb on - strand, within ABIE41_RS07265at 1498.971 kb on - strand, within ABIE41_RS07265at 1499.055 kb on + strandat 1499.055 kb on + strandat 1499.055 kb on + strandat 1499.056 kb on - strandat 1501.381 kb on - strand, within ABIE41_RS07275at 1501.381 kb on - strand, within ABIE41_RS07275at 1501.383 kb on + strand, within ABIE41_RS07275at 1501.383 kb on + strand, within ABIE41_RS07275at 1501.384 kb on - strand, within ABIE41_RS07275at 1501.384 kb on - strand, within ABIE41_RS07275at 1501.384 kb on - strand, within ABIE41_RS07275at 1501.423 kb on - strand, within ABIE41_RS07275at 1501.423 kb on - strand, within ABIE41_RS07275at 1501.423 kb on - strand, within ABIE41_RS07275at 1501.941 kb on - strandat 1501.941 kb on - strandat 1501.941 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A no stress control
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1,498,712 + ABIE41_RS07265 0.17 +1.0
1,498,712 + ABIE41_RS07265 0.17 +0.8
1,498,712 + ABIE41_RS07265 0.17 +0.7
1,498,712 + ABIE41_RS07265 0.17 -0.4
1,498,712 + ABIE41_RS07265 0.17 -0.3
1,498,712 + ABIE41_RS07265 0.17 +0.0
1,498,713 - ABIE41_RS07265 0.17 -0.9
1,498,713 - ABIE41_RS07265 0.17 -0.4
1,498,713 - ABIE41_RS07265 0.17 -0.4
1,498,713 - ABIE41_RS07265 0.17 +0.3
1,498,714 + ABIE41_RS07265 0.17 -0.9
1,498,714 + ABIE41_RS07265 0.17 -0.6
1,498,934 + ABIE41_RS07265 0.70 -0.6
1,498,934 + ABIE41_RS07265 0.70 -0.4
1,498,934 + ABIE41_RS07265 0.70 -0.2
1,498,935 - ABIE41_RS07265 0.70 -0.6
1,498,942 + ABIE41_RS07265 0.72 -0.6
1,498,942 + ABIE41_RS07265 0.72 +1.4
1,498,943 - ABIE41_RS07265 0.72 +1.9
1,498,943 - ABIE41_RS07265 0.72 -1.3
1,498,971 - ABIE41_RS07265 0.79 -2.6
1,499,055 + -0.2
1,499,055 + +1.1
1,499,055 + +2.4
1,499,056 - -1.8
1,501,381 - ABIE41_RS07275 0.39 -0.5
1,501,381 - ABIE41_RS07275 0.39 -0.4
1,501,383 + ABIE41_RS07275 0.39 -0.3
1,501,383 + ABIE41_RS07275 0.39 +1.0
1,501,384 - ABIE41_RS07275 0.39 -3.0
1,501,384 - ABIE41_RS07275 0.39 +0.4
1,501,384 - ABIE41_RS07275 0.39 -0.2
1,501,423 - ABIE41_RS07275 0.43 +1.1
1,501,423 - ABIE41_RS07275 0.43 -0.1
1,501,423 - ABIE41_RS07275 0.43 -0.9
1,501,941 - -0.3
1,501,941 - -0.7
1,501,941 - -0.1

Or see this region's nucleotide sequence